Hb_000346_080

Information

Type -
Description -
Location Contig346: 76361-78213
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP30862.1
description hypothetical protein JCGZ_13805 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K417
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13805 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000346_080 0.0 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
2 Hb_002835_060 0.2069117165 - - PREDICTED: uncharacterized protein LOC105640295 [Jatropha curcas]
3 Hb_133047_030 0.2119631242 - - nuclear acid binding protein, putative [Ricinus communis]
4 Hb_000612_050 0.2153881458 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
5 Hb_132317_010 0.2281718448 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
6 Hb_000243_050 0.2336491104 - - ADP-ribosylation factor, putative [Ricinus communis]
7 Hb_003938_100 0.2337317782 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001301_070 0.238251743 - - -
9 Hb_138667_010 0.2401739224 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
10 Hb_000280_120 0.2425518159 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
11 Hb_000192_060 0.2433835813 - - -
12 Hb_168909_010 0.2458209307 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
13 Hb_151411_010 0.2493529042 - - -
14 Hb_000209_010 0.2524563036 - - -
15 Hb_028872_040 0.2550533049 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_002056_140 0.2554756197 - - -
17 Hb_002815_040 0.2606550524 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
18 Hb_038190_030 0.2607472059 - - -
19 Hb_000916_010 0.2617875318 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
20 Hb_039547_010 0.2622032135 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_000346_080 Hb_000346_080 Hb_002835_060 Hb_002835_060 Hb_000346_080--Hb_002835_060 Hb_133047_030 Hb_133047_030 Hb_000346_080--Hb_133047_030 Hb_000612_050 Hb_000612_050 Hb_000346_080--Hb_000612_050 Hb_132317_010 Hb_132317_010 Hb_000346_080--Hb_132317_010 Hb_000243_050 Hb_000243_050 Hb_000346_080--Hb_000243_050 Hb_003938_100 Hb_003938_100 Hb_000346_080--Hb_003938_100 Hb_071160_010 Hb_071160_010 Hb_002835_060--Hb_071160_010 Hb_004767_060 Hb_004767_060 Hb_002835_060--Hb_004767_060 Hb_002232_050 Hb_002232_050 Hb_002835_060--Hb_002232_050 Hb_022108_010 Hb_022108_010 Hb_002835_060--Hb_022108_010 Hb_000808_220 Hb_000808_220 Hb_002835_060--Hb_000808_220 Hb_133047_030--Hb_132317_010 Hb_012538_010 Hb_012538_010 Hb_133047_030--Hb_012538_010 Hb_006103_040 Hb_006103_040 Hb_133047_030--Hb_006103_040 Hb_033286_020 Hb_033286_020 Hb_133047_030--Hb_033286_020 Hb_002888_080 Hb_002888_080 Hb_133047_030--Hb_002888_080 Hb_139605_010 Hb_139605_010 Hb_000612_050--Hb_139605_010 Hb_000574_290 Hb_000574_290 Hb_000612_050--Hb_000574_290 Hb_066206_010 Hb_066206_010 Hb_000612_050--Hb_066206_010 Hb_000803_230 Hb_000803_230 Hb_000612_050--Hb_000803_230 Hb_000043_040 Hb_000043_040 Hb_000612_050--Hb_000043_040 Hb_007193_050 Hb_007193_050 Hb_132317_010--Hb_007193_050 Hb_024468_040 Hb_024468_040 Hb_132317_010--Hb_024468_040 Hb_027380_250 Hb_027380_250 Hb_132317_010--Hb_027380_250 Hb_132317_010--Hb_012538_010 Hb_138667_010 Hb_138667_010 Hb_000243_050--Hb_138667_010 Hb_000280_120 Hb_000280_120 Hb_000243_050--Hb_000280_120 Hb_000243_050--Hb_003938_100 Hb_168909_010 Hb_168909_010 Hb_000243_050--Hb_168909_010 Hb_001301_070 Hb_001301_070 Hb_000243_050--Hb_001301_070 Hb_028872_040 Hb_028872_040 Hb_000243_050--Hb_028872_040 Hb_003938_100--Hb_138667_010 Hb_038190_030 Hb_038190_030 Hb_003938_100--Hb_038190_030 Hb_003938_100--Hb_001301_070 Hb_003938_100--Hb_000280_120 Hb_002056_140 Hb_002056_140 Hb_003938_100--Hb_002056_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0377092 0 0 0.0118369 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0180577 0.0475013

CAGE analysis