Hb_033286_020

Information

Type -
Description -
Location Contig33286: 7742-9074
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016740
description probable beta- -galactosyltransferase 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033286_020 0.0 - - -
2 Hb_006856_020 0.21545968 - - -
3 Hb_002888_080 0.2476086692 - - PREDICTED: uncharacterized protein LOC104120414 [Nicotiana tomentosiformis]
4 Hb_004228_040 0.2538096652 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
5 Hb_133047_030 0.2546864316 - - nuclear acid binding protein, putative [Ricinus communis]
6 Hb_001496_020 0.2719912655 - - putative WRKY transcription factor 19 -like protein [Gossypium arboreum]
7 Hb_000832_350 0.275709992 - - Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative [Ricinus communis]
8 Hb_132317_010 0.2805502513 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
9 Hb_000072_040 0.2885837121 - - -
10 Hb_148593_010 0.3019349946 - - PREDICTED: serine/threonine-protein kinase ATR-like [Jatropha curcas]
11 Hb_012538_010 0.3042527769 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_001086_030 0.3049838236 - - Disease resistance protein RPS5, putative [Ricinus communis]
13 Hb_000363_470 0.3077815073 - - hypothetical protein JCGZ_00950 [Jatropha curcas]
14 Hb_006274_020 0.3080029765 - - structural constituent of cell wall, putative [Ricinus communis]
15 Hb_003297_040 0.3095939113 - - Disease resistance protein RPM1, putative [Ricinus communis]
16 Hb_019641_020 0.3109063284 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
17 Hb_001496_140 0.3128630523 - - -
18 Hb_105581_010 0.3165112051 - - hypothetical protein, partial [Pseudomonas fluorescens]
19 Hb_012305_090 0.3179046505 - - hypothetical protein VITISV_018166 [Vitis vinifera]
20 Hb_014548_030 0.3209102741 - - PREDICTED: uncharacterized protein LOC104897580 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_033286_020 Hb_033286_020 Hb_006856_020 Hb_006856_020 Hb_033286_020--Hb_006856_020 Hb_002888_080 Hb_002888_080 Hb_033286_020--Hb_002888_080 Hb_004228_040 Hb_004228_040 Hb_033286_020--Hb_004228_040 Hb_133047_030 Hb_133047_030 Hb_033286_020--Hb_133047_030 Hb_001496_020 Hb_001496_020 Hb_033286_020--Hb_001496_020 Hb_000832_350 Hb_000832_350 Hb_033286_020--Hb_000832_350 Hb_003297_040 Hb_003297_040 Hb_006856_020--Hb_003297_040 Hb_006856_020--Hb_000832_350 Hb_169514_010 Hb_169514_010 Hb_006856_020--Hb_169514_010 Hb_011618_020 Hb_011618_020 Hb_006856_020--Hb_011618_020 Hb_006856_020--Hb_001496_020 Hb_157029_010 Hb_157029_010 Hb_002888_080--Hb_157029_010 Hb_108557_010 Hb_108557_010 Hb_002888_080--Hb_108557_010 Hb_002888_080--Hb_004228_040 Hb_100332_020 Hb_100332_020 Hb_002888_080--Hb_100332_020 Hb_000832_010 Hb_000832_010 Hb_002888_080--Hb_000832_010 Hb_001871_030 Hb_001871_030 Hb_002888_080--Hb_001871_030 Hb_001652_040 Hb_001652_040 Hb_004228_040--Hb_001652_040 Hb_004228_040--Hb_108557_010 Hb_004228_040--Hb_157029_010 Hb_001225_060 Hb_001225_060 Hb_004228_040--Hb_001225_060 Hb_132317_010 Hb_132317_010 Hb_133047_030--Hb_132317_010 Hb_000346_080 Hb_000346_080 Hb_133047_030--Hb_000346_080 Hb_012538_010 Hb_012538_010 Hb_133047_030--Hb_012538_010 Hb_006103_040 Hb_006103_040 Hb_133047_030--Hb_006103_040 Hb_133047_030--Hb_002888_080 Hb_001496_020--Hb_003297_040 Hb_002003_120 Hb_002003_120 Hb_001496_020--Hb_002003_120 Hb_001496_020--Hb_000832_350 Hb_000072_040 Hb_000072_040 Hb_001496_020--Hb_000072_040 Hb_000832_350--Hb_003297_040 Hb_001799_220 Hb_001799_220 Hb_000832_350--Hb_001799_220 Hb_030370_010 Hb_030370_010 Hb_000832_350--Hb_030370_010 Hb_033908_010 Hb_033908_010 Hb_000832_350--Hb_033908_010 Hb_001496_140 Hb_001496_140 Hb_000832_350--Hb_001496_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.025669 0 0 0.0256041 0.0450228
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0928661 0.0933612

CAGE analysis