Hb_100332_020

Information

Type -
Description -
Location Contig100332: 8117-16350
Sequence    

Annotation

kegg
ID mus:103998575
description uncharacterized protein LOC103998575
nr
ID XP_011087128.1
description PREDICTED: uncharacterized protein LOC105168695 [Sesamum indicum]
swissprot
ID -
description -
trembl
ID Q0DQW8
description Os03g0439900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0439900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100332_020 0.0 - - PREDICTED: uncharacterized protein LOC105168695 [Sesamum indicum]
2 Hb_000028_270 0.160139343 - - -
3 Hb_005765_020 0.187662876 - - -
4 Hb_058095_030 0.1932906951 - - -
5 Hb_006992_030 0.1959404156 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
6 Hb_090889_010 0.1960187608 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
7 Hb_001856_110 0.202477419 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]
8 Hb_064106_010 0.2073810578 - - PREDICTED: uncharacterized protein LOC104878249 [Vitis vinifera]
9 Hb_089568_010 0.2076716643 - - ferric reductase oxidase [Manihot esculenta]
10 Hb_142522_040 0.2091659597 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_001366_260 0.20922484 - - T4.15 [Malus x robusta]
12 Hb_009434_060 0.2140260933 - - T4.15 [Malus x robusta]
13 Hb_071130_020 0.2186808866 - - -
14 Hb_001229_030 0.2202923032 - - PREDICTED: uncharacterized protein LOC104783713 [Camelina sativa]
15 Hb_003527_020 0.2212655423 - - BnaC01g27150D [Brassica napus]
16 Hb_003494_180 0.2215981319 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
17 Hb_000527_120 0.2217643231 - - hypothetical protein VITISV_027174 [Vitis vinifera]
18 Hb_001355_050 0.2217735012 - - -
19 Hb_118046_010 0.2218313042 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
20 Hb_003062_020 0.2235281549 - - Polyprotein, putative [Solanum demissum]

Gene co-expression network

sample Hb_100332_020 Hb_100332_020 Hb_000028_270 Hb_000028_270 Hb_100332_020--Hb_000028_270 Hb_005765_020 Hb_005765_020 Hb_100332_020--Hb_005765_020 Hb_058095_030 Hb_058095_030 Hb_100332_020--Hb_058095_030 Hb_006992_030 Hb_006992_030 Hb_100332_020--Hb_006992_030 Hb_090889_010 Hb_090889_010 Hb_100332_020--Hb_090889_010 Hb_001856_110 Hb_001856_110 Hb_100332_020--Hb_001856_110 Hb_000028_270--Hb_058095_030 Hb_118046_010 Hb_118046_010 Hb_000028_270--Hb_118046_010 Hb_004063_010 Hb_004063_010 Hb_000028_270--Hb_004063_010 Hb_003442_120 Hb_003442_120 Hb_000028_270--Hb_003442_120 Hb_000028_270--Hb_005765_020 Hb_002585_060 Hb_002585_060 Hb_000028_270--Hb_002585_060 Hb_005765_020--Hb_006992_030 Hb_005765_020--Hb_058095_030 Hb_005765_020--Hb_002585_060 Hb_003927_020 Hb_003927_020 Hb_005765_020--Hb_003927_020 Hb_032299_070 Hb_032299_070 Hb_005765_020--Hb_032299_070 Hb_058095_030--Hb_002585_060 Hb_058095_030--Hb_004063_010 Hb_058095_030--Hb_118046_010 Hb_008642_050 Hb_008642_050 Hb_058095_030--Hb_008642_050 Hb_001355_050 Hb_001355_050 Hb_006992_030--Hb_001355_050 Hb_006992_030--Hb_003927_020 Hb_005595_030 Hb_005595_030 Hb_006992_030--Hb_005595_030 Hb_023547_020 Hb_023547_020 Hb_006992_030--Hb_023547_020 Hb_001880_020 Hb_001880_020 Hb_006992_030--Hb_001880_020 Hb_003062_020 Hb_003062_020 Hb_090889_010--Hb_003062_020 Hb_012807_070 Hb_012807_070 Hb_090889_010--Hb_012807_070 Hb_089568_010 Hb_089568_010 Hb_090889_010--Hb_089568_010 Hb_006356_010 Hb_006356_010 Hb_090889_010--Hb_006356_010 Hb_000039_190 Hb_000039_190 Hb_090889_010--Hb_000039_190 Hb_001587_050 Hb_001587_050 Hb_090889_010--Hb_001587_050 Hb_000009_390 Hb_000009_390 Hb_001856_110--Hb_000009_390 Hb_071130_020 Hb_071130_020 Hb_001856_110--Hb_071130_020 Hb_003683_200 Hb_003683_200 Hb_001856_110--Hb_003683_200 Hb_031949_010 Hb_031949_010 Hb_001856_110--Hb_031949_010 Hb_000680_020 Hb_000680_020 Hb_001856_110--Hb_000680_020 Hb_003494_180 Hb_003494_180 Hb_001856_110--Hb_003494_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0848716 0.0535453 0 0 0.0124799
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0611185 0.15987

CAGE analysis