Hb_089568_010

Information

Type -
Description -
Location Contig89568: 2724-4571
Sequence    

Annotation

kegg
ID rcu:RCOM_1616230
description ferric-chelate reductase, putative (EC:1.6.3.1)
nr
ID ADR70887.1
description ferric reductase oxidase [Manihot esculenta]
swissprot
ID P92949
description Ferric reduction oxidase 2 OS=Arabidopsis thaliana GN=FRO2 PE=1 SV=2
trembl
ID V9HYT0
description Ferric reductase oxidase OS=Manihot esculenta GN=FRO2 PE=2 SV=1
Gene Ontology
ID GO:0016021
description ferric reduction oxidase 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089568_010 0.0 - - ferric reductase oxidase [Manihot esculenta]
2 Hb_001587_050 0.0552597851 - - -
3 Hb_006356_010 0.0724360966 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
4 Hb_090889_010 0.133004721 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
5 Hb_003302_010 0.1512274635 - - PREDICTED: alpha-dioxygenase 1 [Jatropha curcas]
6 Hb_080033_020 0.1531248748 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
7 Hb_144045_010 0.1581959731 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor NGA1-like [Jatropha curcas]
8 Hb_001355_050 0.1643897809 - - -
9 Hb_000042_310 0.1674217936 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
10 Hb_000987_160 0.174555255 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
11 Hb_004374_100 0.1844677304 - - PREDICTED: phosphoglycerate mutase-like protein AT74H [Jatropha curcas]
12 Hb_000049_170 0.1850631519 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000512_050 0.1947693526 - - hypothetical protein VITISV_005640 [Vitis vinifera]
14 Hb_000280_030 0.1984433591 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
15 Hb_006992_030 0.1998197372 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
16 Hb_000826_080 0.2003765386 - - -
17 Hb_000039_190 0.2022826282 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_100332_020 0.2076716643 - - PREDICTED: uncharacterized protein LOC105168695 [Sesamum indicum]
19 Hb_023547_020 0.2098053928 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000638_270 0.2123823359 - - -

Gene co-expression network

sample Hb_089568_010 Hb_089568_010 Hb_001587_050 Hb_001587_050 Hb_089568_010--Hb_001587_050 Hb_006356_010 Hb_006356_010 Hb_089568_010--Hb_006356_010 Hb_090889_010 Hb_090889_010 Hb_089568_010--Hb_090889_010 Hb_003302_010 Hb_003302_010 Hb_089568_010--Hb_003302_010 Hb_080033_020 Hb_080033_020 Hb_089568_010--Hb_080033_020 Hb_144045_010 Hb_144045_010 Hb_089568_010--Hb_144045_010 Hb_001587_050--Hb_006356_010 Hb_001587_050--Hb_144045_010 Hb_001587_050--Hb_080033_020 Hb_000042_310 Hb_000042_310 Hb_001587_050--Hb_000042_310 Hb_001587_050--Hb_090889_010 Hb_000987_160 Hb_000987_160 Hb_006356_010--Hb_000987_160 Hb_006356_010--Hb_090889_010 Hb_006356_010--Hb_000042_310 Hb_004374_100 Hb_004374_100 Hb_006356_010--Hb_004374_100 Hb_003062_020 Hb_003062_020 Hb_090889_010--Hb_003062_020 Hb_012807_070 Hb_012807_070 Hb_090889_010--Hb_012807_070 Hb_000039_190 Hb_000039_190 Hb_090889_010--Hb_000039_190 Hb_023738_010 Hb_023738_010 Hb_003302_010--Hb_023738_010 Hb_003302_010--Hb_080033_020 Hb_003302_010--Hb_144045_010 Hb_000512_050 Hb_000512_050 Hb_003302_010--Hb_000512_050 Hb_005092_090 Hb_005092_090 Hb_003302_010--Hb_005092_090 Hb_000060_130 Hb_000060_130 Hb_003302_010--Hb_000060_130 Hb_080033_020--Hb_000512_050 Hb_005623_060 Hb_005623_060 Hb_080033_020--Hb_005623_060 Hb_004407_030 Hb_004407_030 Hb_080033_020--Hb_004407_030 Hb_003169_040 Hb_003169_040 Hb_080033_020--Hb_003169_040 Hb_144045_010--Hb_000042_310 Hb_003299_060 Hb_003299_060 Hb_144045_010--Hb_003299_060 Hb_015824_010 Hb_015824_010 Hb_144045_010--Hb_015824_010 Hb_144045_010--Hb_004374_100 Hb_000280_030 Hb_000280_030 Hb_144045_010--Hb_000280_030 Hb_001691_170 Hb_001691_170 Hb_144045_010--Hb_001691_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0225246 0.0404695 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0196417 0.0982421

CAGE analysis