Hb_000987_160

Information

Type -
Description -
Location Contig987: 145294-146712
Sequence    

Annotation

kegg
ID pop:POPTR_0019s15000g
description hypothetical protein
nr
ID XP_012080760.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067KEU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15189 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at4g08850 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000987_160 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
2 Hb_006356_010 0.1227452896 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
3 Hb_003050_010 0.1283386021 - - PREDICTED: VQ motif-containing protein 1-like [Jatropha curcas]
4 Hb_000334_160 0.1342281488 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000039_190 0.1591306604 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
6 Hb_001285_020 0.1640567687 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_089568_010 0.174555255 - - ferric reductase oxidase [Manihot esculenta]
8 Hb_001587_050 0.1809108323 - - -
9 Hb_005831_010 0.1817240613 - - hypothetical protein JCGZ_04003 [Jatropha curcas]
10 Hb_002025_290 0.1990519933 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
11 Hb_023547_020 0.2034436491 - - conserved hypothetical protein [Ricinus communis]
12 Hb_090889_010 0.2047770146 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
13 Hb_000042_310 0.2059467481 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
14 Hb_000500_360 0.2060507917 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
15 Hb_000300_070 0.2098287392 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
16 Hb_000280_030 0.2128943675 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
17 Hb_010532_010 0.2137599957 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X1 [Populus euphratica]
18 Hb_006449_060 0.2139693952 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
19 Hb_004374_100 0.2155194455 - - PREDICTED: phosphoglycerate mutase-like protein AT74H [Jatropha curcas]
20 Hb_000252_240 0.2156663115 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X2 [Gossypium raimondii]

Gene co-expression network

sample Hb_000987_160 Hb_000987_160 Hb_006356_010 Hb_006356_010 Hb_000987_160--Hb_006356_010 Hb_003050_010 Hb_003050_010 Hb_000987_160--Hb_003050_010 Hb_000334_160 Hb_000334_160 Hb_000987_160--Hb_000334_160 Hb_000039_190 Hb_000039_190 Hb_000987_160--Hb_000039_190 Hb_001285_020 Hb_001285_020 Hb_000987_160--Hb_001285_020 Hb_089568_010 Hb_089568_010 Hb_000987_160--Hb_089568_010 Hb_001587_050 Hb_001587_050 Hb_006356_010--Hb_001587_050 Hb_006356_010--Hb_089568_010 Hb_090889_010 Hb_090889_010 Hb_006356_010--Hb_090889_010 Hb_000042_310 Hb_000042_310 Hb_006356_010--Hb_000042_310 Hb_004374_100 Hb_004374_100 Hb_006356_010--Hb_004374_100 Hb_003050_010--Hb_001285_020 Hb_002025_290 Hb_002025_290 Hb_003050_010--Hb_002025_290 Hb_003050_010--Hb_000334_160 Hb_009102_010 Hb_009102_010 Hb_003050_010--Hb_009102_010 Hb_003050_010--Hb_000039_190 Hb_000334_160--Hb_000039_190 Hb_004554_010 Hb_004554_010 Hb_000334_160--Hb_004554_010 Hb_000300_070 Hb_000300_070 Hb_000334_160--Hb_000300_070 Hb_000334_160--Hb_001285_020 Hb_001040_090 Hb_001040_090 Hb_000039_190--Hb_001040_090 Hb_000039_190--Hb_090889_010 Hb_094439_010 Hb_094439_010 Hb_000039_190--Hb_094439_010 Hb_003062_020 Hb_003062_020 Hb_000039_190--Hb_003062_020 Hb_001285_020--Hb_002025_290 Hb_001285_020--Hb_009102_010 Hb_005575_010 Hb_005575_010 Hb_001285_020--Hb_005575_010 Hb_003453_060 Hb_003453_060 Hb_001285_020--Hb_003453_060 Hb_000500_360 Hb_000500_360 Hb_001285_020--Hb_000500_360 Hb_089568_010--Hb_001587_050 Hb_089568_010--Hb_090889_010 Hb_003302_010 Hb_003302_010 Hb_089568_010--Hb_003302_010 Hb_080033_020 Hb_080033_020 Hb_089568_010--Hb_080033_020 Hb_144045_010 Hb_144045_010 Hb_089568_010--Hb_144045_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0121028 0.0549951 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0209298 0.0546728

CAGE analysis