Hb_004554_010

Information

Type -
Description -
Location Contig4554: 14962-17485
Sequence    

Annotation

kegg
ID gmx:100776617
description uncharacterized LOC100776617
nr
ID XP_012074844.1
description PREDICTED: uncharacterized protein LOC105636233 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUN0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08992 PE=4 SV=1
Gene Ontology
ID GO:0046872
description heavy metal transport detoxification superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004554_010 0.0 - - PREDICTED: uncharacterized protein LOC105636233 isoform X1 [Jatropha curcas]
2 Hb_000445_310 0.1541892652 - - hypothetical protein B456_011G218000 [Gossypium raimondii]
3 Hb_000163_140 0.1608084357 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
4 Hb_152180_010 0.1671899994 - - Blue copper protein precursor, putative [Ricinus communis]
5 Hb_000300_070 0.1681806848 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
6 Hb_014658_010 0.1742585832 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
7 Hb_031862_160 0.1804099329 - - unnamed protein product [Vitis vinifera]
8 Hb_000334_160 0.1853430671 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000479_340 0.1872291796 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
10 Hb_002571_110 0.2025523863 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
11 Hb_007225_010 0.2026514025 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
12 Hb_001401_050 0.2074342046 - - PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Jatropha curcas]
13 Hb_002918_170 0.2085670881 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]
14 Hb_173107_010 0.2149991623 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
15 Hb_103709_010 0.2179578465 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
16 Hb_000252_240 0.2186916766 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X2 [Gossypium raimondii]
17 Hb_007761_040 0.2192999032 - - carbonyl reductase, putative [Ricinus communis]
18 Hb_001544_060 0.2198739511 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB4 isoform X2 [Jatropha curcas]
19 Hb_001476_040 0.2225203729 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
20 Hb_005511_080 0.2228611116 - - Protein MLO, putative [Ricinus communis]

Gene co-expression network

sample Hb_004554_010 Hb_004554_010 Hb_000445_310 Hb_000445_310 Hb_004554_010--Hb_000445_310 Hb_000163_140 Hb_000163_140 Hb_004554_010--Hb_000163_140 Hb_152180_010 Hb_152180_010 Hb_004554_010--Hb_152180_010 Hb_000300_070 Hb_000300_070 Hb_004554_010--Hb_000300_070 Hb_014658_010 Hb_014658_010 Hb_004554_010--Hb_014658_010 Hb_031862_160 Hb_031862_160 Hb_004554_010--Hb_031862_160 Hb_000445_310--Hb_000163_140 Hb_001544_060 Hb_001544_060 Hb_000445_310--Hb_001544_060 Hb_000445_310--Hb_000300_070 Hb_000252_240 Hb_000252_240 Hb_000445_310--Hb_000252_240 Hb_001958_030 Hb_001958_030 Hb_000445_310--Hb_001958_030 Hb_000188_070 Hb_000188_070 Hb_000445_310--Hb_000188_070 Hb_002918_170 Hb_002918_170 Hb_000163_140--Hb_002918_170 Hb_000163_140--Hb_001958_030 Hb_000163_140--Hb_000300_070 Hb_003387_010 Hb_003387_010 Hb_000163_140--Hb_003387_010 Hb_000163_140--Hb_000188_070 Hb_152180_010--Hb_014658_010 Hb_027556_070 Hb_027556_070 Hb_152180_010--Hb_027556_070 Hb_001476_040 Hb_001476_040 Hb_152180_010--Hb_001476_040 Hb_007225_010 Hb_007225_010 Hb_152180_010--Hb_007225_010 Hb_005622_030 Hb_005622_030 Hb_152180_010--Hb_005622_030 Hb_000300_070--Hb_000252_240 Hb_000300_070--Hb_001544_060 Hb_124677_010 Hb_124677_010 Hb_000300_070--Hb_124677_010 Hb_002025_290 Hb_002025_290 Hb_000300_070--Hb_002025_290 Hb_173107_010 Hb_173107_010 Hb_014658_010--Hb_173107_010 Hb_002571_110 Hb_002571_110 Hb_014658_010--Hb_002571_110 Hb_014658_010--Hb_001476_040 Hb_000186_020 Hb_000186_020 Hb_014658_010--Hb_000186_020 Hb_011900_030 Hb_011900_030 Hb_031862_160--Hb_011900_030 Hb_007761_040 Hb_007761_040 Hb_031862_160--Hb_007761_040 Hb_031862_160--Hb_002571_110 Hb_000037_210 Hb_000037_210 Hb_031862_160--Hb_000037_210 Hb_009083_060 Hb_009083_060 Hb_031862_160--Hb_009083_060 Hb_003428_020 Hb_003428_020 Hb_031862_160--Hb_003428_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.21394 18.7579 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.60922 6.02758

CAGE analysis