Hb_001476_040

Information

Type -
Description -
Location Contig1476: 34573-35726
Sequence    

Annotation

kegg
ID rcu:RCOM_1622030
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID XP_002512127.1
description Cationic peroxidase 2 precursor, putative [Ricinus communis]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID B9RCX9
description Peroxidase OS=Ricinus communis GN=RCOM_1622030 PE=3 SV=1
Gene Ontology
ID GO:0005576
description bacterial-induced peroxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001476_040 0.0 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
2 Hb_145188_010 0.1049847543 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
3 Hb_000362_080 0.113200164 - - hypothetical protein EUTSA_v10027329mg, partial [Eutrema salsugineum]
4 Hb_009846_010 0.1271230661 - - PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]
5 Hb_007262_010 0.1278581984 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X2 [Jatropha curcas]
6 Hb_004218_060 0.1305668217 - - annexin [Manihot esculenta]
7 Hb_000163_140 0.1332915761 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
8 Hb_009293_030 0.1341622379 - - PREDICTED: salicylate carboxymethyltransferase [Jatropha curcas]
9 Hb_003387_010 0.1375967139 - - PREDICTED: protein kinase PINOID 2 [Gossypium raimondii]
10 Hb_000465_030 0.1500930565 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
11 Hb_005736_120 0.1501329324 - - PREDICTED: carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic [Gossypium raimondii]
12 Hb_001401_050 0.1551118456 - - PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Jatropha curcas]
13 Hb_001284_050 0.155748379 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]
14 Hb_004223_120 0.1588551879 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
15 Hb_001033_080 0.1596795649 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
16 Hb_163950_090 0.1599093012 - - PREDICTED: traB domain-containing protein isoform X1 [Jatropha curcas]
17 Hb_005357_210 0.1603997177 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
18 Hb_008221_190 0.1610006603 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
19 Hb_009189_090 0.1613746577 - - protein phosphatase-2c, putative [Ricinus communis]
20 Hb_002918_170 0.1625688183 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]

Gene co-expression network

sample Hb_001476_040 Hb_001476_040 Hb_145188_010 Hb_145188_010 Hb_001476_040--Hb_145188_010 Hb_000362_080 Hb_000362_080 Hb_001476_040--Hb_000362_080 Hb_009846_010 Hb_009846_010 Hb_001476_040--Hb_009846_010 Hb_007262_010 Hb_007262_010 Hb_001476_040--Hb_007262_010 Hb_004218_060 Hb_004218_060 Hb_001476_040--Hb_004218_060 Hb_000163_140 Hb_000163_140 Hb_001476_040--Hb_000163_140 Hb_145188_010--Hb_004218_060 Hb_145188_010--Hb_007262_010 Hb_163950_090 Hb_163950_090 Hb_145188_010--Hb_163950_090 Hb_005736_120 Hb_005736_120 Hb_145188_010--Hb_005736_120 Hb_145188_010--Hb_000362_080 Hb_000362_080--Hb_009846_010 Hb_009293_030 Hb_009293_030 Hb_000362_080--Hb_009293_030 Hb_001374_050 Hb_001374_050 Hb_000362_080--Hb_001374_050 Hb_002929_030 Hb_002929_030 Hb_000362_080--Hb_002929_030 Hb_000836_620 Hb_000836_620 Hb_000362_080--Hb_000836_620 Hb_009771_010 Hb_009771_010 Hb_000362_080--Hb_009771_010 Hb_009846_010--Hb_009293_030 Hb_009846_010--Hb_009771_010 Hb_089140_130 Hb_089140_130 Hb_009846_010--Hb_089140_130 Hb_009846_010--Hb_002929_030 Hb_001153_170 Hb_001153_170 Hb_009846_010--Hb_001153_170 Hb_003750_110 Hb_003750_110 Hb_007262_010--Hb_003750_110 Hb_007262_010--Hb_004218_060 Hb_007262_010--Hb_000836_620 Hb_007262_010--Hb_000362_080 Hb_007262_010--Hb_005736_120 Hb_004218_060--Hb_005736_120 Hb_002710_040 Hb_002710_040 Hb_004218_060--Hb_002710_040 Hb_001942_060 Hb_001942_060 Hb_004218_060--Hb_001942_060 Hb_004218_060--Hb_163950_090 Hb_000445_310 Hb_000445_310 Hb_000163_140--Hb_000445_310 Hb_002918_170 Hb_002918_170 Hb_000163_140--Hb_002918_170 Hb_001958_030 Hb_001958_030 Hb_000163_140--Hb_001958_030 Hb_000300_070 Hb_000300_070 Hb_000163_140--Hb_000300_070 Hb_003387_010 Hb_003387_010 Hb_000163_140--Hb_003387_010 Hb_000188_070 Hb_000188_070 Hb_000163_140--Hb_000188_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.226085 0.0183008 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0166844 0.0846129

CAGE analysis