Hb_007262_010

Information

Type -
Description -
Location Contig7262: 16034-18505
Sequence    

Annotation

kegg
ID rcu:RCOM_0272140
description hypothetical protein
nr
ID XP_012081191.1
description PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2C6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17029 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007262_010 0.0 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X2 [Jatropha curcas]
2 Hb_145188_010 0.0979805937 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
3 Hb_003750_110 0.0987832125 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
4 Hb_004218_060 0.0990363508 - - annexin [Manihot esculenta]
5 Hb_000836_620 0.1023332677 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
6 Hb_000362_080 0.1043892348 - - hypothetical protein EUTSA_v10027329mg, partial [Eutrema salsugineum]
7 Hb_005736_120 0.1052267183 - - PREDICTED: carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic [Gossypium raimondii]
8 Hb_001374_050 0.1052293052 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
9 Hb_006267_040 0.1116494308 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
10 Hb_001942_060 0.1134751769 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003683_170 0.1151603055 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009846_010 0.1191204267 - - PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]
13 Hb_001377_080 0.1200469363 - - PREDICTED: uncharacterized protein LOC105642864 [Jatropha curcas]
14 Hb_000080_070 0.1222187787 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
15 Hb_001638_060 0.1233793508 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
16 Hb_002162_020 0.1239818767 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
17 Hb_000821_030 0.1253383646 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 [Jatropha curcas]
18 Hb_000030_070 0.1254124123 - - conserved hypothetical protein [Ricinus communis]
19 Hb_101133_030 0.1261476903 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
20 Hb_124677_010 0.1277319844 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007262_010 Hb_007262_010 Hb_145188_010 Hb_145188_010 Hb_007262_010--Hb_145188_010 Hb_003750_110 Hb_003750_110 Hb_007262_010--Hb_003750_110 Hb_004218_060 Hb_004218_060 Hb_007262_010--Hb_004218_060 Hb_000836_620 Hb_000836_620 Hb_007262_010--Hb_000836_620 Hb_000362_080 Hb_000362_080 Hb_007262_010--Hb_000362_080 Hb_005736_120 Hb_005736_120 Hb_007262_010--Hb_005736_120 Hb_145188_010--Hb_004218_060 Hb_163950_090 Hb_163950_090 Hb_145188_010--Hb_163950_090 Hb_145188_010--Hb_005736_120 Hb_001476_040 Hb_001476_040 Hb_145188_010--Hb_001476_040 Hb_145188_010--Hb_000362_080 Hb_003750_110--Hb_000836_620 Hb_005460_040 Hb_005460_040 Hb_003750_110--Hb_005460_040 Hb_001374_050 Hb_001374_050 Hb_003750_110--Hb_001374_050 Hb_000142_050 Hb_000142_050 Hb_003750_110--Hb_000142_050 Hb_000080_070 Hb_000080_070 Hb_003750_110--Hb_000080_070 Hb_002042_090 Hb_002042_090 Hb_003750_110--Hb_002042_090 Hb_004218_060--Hb_005736_120 Hb_002710_040 Hb_002710_040 Hb_004218_060--Hb_002710_040 Hb_001942_060 Hb_001942_060 Hb_004218_060--Hb_001942_060 Hb_004218_060--Hb_163950_090 Hb_002929_030 Hb_002929_030 Hb_000836_620--Hb_002929_030 Hb_001433_210 Hb_001433_210 Hb_000836_620--Hb_001433_210 Hb_000635_240 Hb_000635_240 Hb_000836_620--Hb_000635_240 Hb_000210_210 Hb_000210_210 Hb_000836_620--Hb_000210_210 Hb_000836_620--Hb_000142_050 Hb_009846_010 Hb_009846_010 Hb_000362_080--Hb_009846_010 Hb_009293_030 Hb_009293_030 Hb_000362_080--Hb_009293_030 Hb_000362_080--Hb_001374_050 Hb_000362_080--Hb_002929_030 Hb_000362_080--Hb_000836_620 Hb_009771_010 Hb_009771_010 Hb_000362_080--Hb_009771_010 Hb_005736_120--Hb_163950_090 Hb_005736_120--Hb_001942_060 Hb_000749_140 Hb_000749_140 Hb_005736_120--Hb_000749_140 Hb_001233_050 Hb_001233_050 Hb_005736_120--Hb_001233_050 Hb_003683_170 Hb_003683_170 Hb_005736_120--Hb_003683_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.5424 0.239483 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0944803 1.05489

CAGE analysis