Hb_014658_010

Information

Type -
Description -
Location Contig14658: 6179-7356
Sequence    

Annotation

kegg
ID eus:EUTSA_v10014451mg
description hypothetical protein
nr
ID 2G4L
description Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
swissprot
ID P52704
description (S)-hydroxynitrile lyase OS=Hevea brasiliensis GN=HNL PE=1 SV=1
trembl
ID O49897
description Alpha-hydroxynitrile lyase OS=Manihot esculenta GN=HNL4 PE=4 SV=1
Gene Ontology
ID GO:0052891
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014658_010 0.0 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
2 Hb_152180_010 0.1075468938 - - Blue copper protein precursor, putative [Ricinus communis]
3 Hb_173107_010 0.1315241598 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
4 Hb_002571_110 0.1579979755 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
5 Hb_004554_010 0.1742585832 - - PREDICTED: uncharacterized protein LOC105636233 isoform X1 [Jatropha curcas]
6 Hb_001476_040 0.1774938233 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
7 Hb_000186_020 0.1823379238 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]
8 Hb_000084_270 0.1823815557 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
9 Hb_014870_010 0.1842920066 - - PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
10 Hb_007676_090 0.1851211357 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
11 Hb_003428_020 0.1859178725 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
12 Hb_000037_210 0.1864366016 - - -
13 Hb_009083_060 0.1866131441 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
14 Hb_001935_050 0.1926089683 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 [Jatropha curcas]
15 Hb_000300_070 0.1987296157 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
16 Hb_007761_040 0.198946577 - - carbonyl reductase, putative [Ricinus communis]
17 Hb_000864_040 0.1993635429 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_000189_610 0.2011811456 - - Late embryogenesis abundant protein D-34, putative [Ricinus communis]
19 Hb_001543_010 0.2016837768 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005622_030 0.2038619181 - - transferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_014658_010 Hb_014658_010 Hb_152180_010 Hb_152180_010 Hb_014658_010--Hb_152180_010 Hb_173107_010 Hb_173107_010 Hb_014658_010--Hb_173107_010 Hb_002571_110 Hb_002571_110 Hb_014658_010--Hb_002571_110 Hb_004554_010 Hb_004554_010 Hb_014658_010--Hb_004554_010 Hb_001476_040 Hb_001476_040 Hb_014658_010--Hb_001476_040 Hb_000186_020 Hb_000186_020 Hb_014658_010--Hb_000186_020 Hb_152180_010--Hb_004554_010 Hb_027556_070 Hb_027556_070 Hb_152180_010--Hb_027556_070 Hb_152180_010--Hb_001476_040 Hb_007225_010 Hb_007225_010 Hb_152180_010--Hb_007225_010 Hb_005622_030 Hb_005622_030 Hb_152180_010--Hb_005622_030 Hb_173107_010--Hb_002571_110 Hb_001377_080 Hb_001377_080 Hb_173107_010--Hb_001377_080 Hb_006555_020 Hb_006555_020 Hb_173107_010--Hb_006555_020 Hb_001284_050 Hb_001284_050 Hb_173107_010--Hb_001284_050 Hb_007761_040 Hb_007761_040 Hb_173107_010--Hb_007761_040 Hb_000084_270 Hb_000084_270 Hb_002571_110--Hb_000084_270 Hb_002571_110--Hb_000186_020 Hb_014870_010 Hb_014870_010 Hb_002571_110--Hb_014870_010 Hb_002571_110--Hb_007761_040 Hb_007676_090 Hb_007676_090 Hb_002571_110--Hb_007676_090 Hb_003428_020 Hb_003428_020 Hb_002571_110--Hb_003428_020 Hb_000445_310 Hb_000445_310 Hb_004554_010--Hb_000445_310 Hb_000163_140 Hb_000163_140 Hb_004554_010--Hb_000163_140 Hb_000300_070 Hb_000300_070 Hb_004554_010--Hb_000300_070 Hb_031862_160 Hb_031862_160 Hb_004554_010--Hb_031862_160 Hb_145188_010 Hb_145188_010 Hb_001476_040--Hb_145188_010 Hb_000362_080 Hb_000362_080 Hb_001476_040--Hb_000362_080 Hb_009846_010 Hb_009846_010 Hb_001476_040--Hb_009846_010 Hb_007262_010 Hb_007262_010 Hb_001476_040--Hb_007262_010 Hb_004218_060 Hb_004218_060 Hb_001476_040--Hb_004218_060 Hb_001476_040--Hb_000163_140 Hb_000186_020--Hb_000084_270 Hb_000186_020--Hb_014870_010 Hb_000186_020--Hb_007676_090 Hb_000186_020--Hb_003428_020 Hb_000037_210 Hb_000037_210 Hb_000186_020--Hb_000037_210 Hb_009083_060 Hb_009083_060 Hb_000186_020--Hb_009083_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.420826 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.044469 0.219774

CAGE analysis