Hb_152180_010

Information

Type -
Description -
Location Contig152180: 1-487
Sequence    

Annotation

kegg
ID rcu:RCOM_1075010
description Blue copper protein precursor, putative
nr
ID XP_002527190.1
description Blue copper protein precursor, putative [Ricinus communis]
swissprot
ID Q07488
description Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
trembl
ID B9SMH1
description Blue copper protein, putative OS=Ricinus communis GN=RCOM_1075010 PE=4 SV=1
Gene Ontology
ID GO:0009055
description blue copper protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152180_010 0.0 - - Blue copper protein precursor, putative [Ricinus communis]
2 Hb_014658_010 0.1075468938 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
3 Hb_004554_010 0.1671899994 - - PREDICTED: uncharacterized protein LOC105636233 isoform X1 [Jatropha curcas]
4 Hb_027556_070 0.169129802 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001476_040 0.1895588487 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
6 Hb_007225_010 0.1904332578 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
7 Hb_005622_030 0.1971799438 - - transferase, putative [Ricinus communis]
8 Hb_000163_140 0.2149716261 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
9 Hb_173107_010 0.2225733178 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
10 Hb_000649_260 0.2257742562 - - uncharacterized LOC105634108 [Jatropha curcas]
11 Hb_000755_090 0.2285961109 - - transferase, putative [Ricinus communis]
12 Hb_002571_110 0.2358507466 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
13 Hb_000300_070 0.2362736266 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
14 Hb_099509_010 0.2401796655 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
15 Hb_000445_310 0.241090587 - - hypothetical protein B456_011G218000 [Gossypium raimondii]
16 Hb_000103_170 0.2416561163 - - uncharacterized protein LOC100501254 [Zea mays]
17 Hb_145188_010 0.2422537863 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
18 Hb_006277_090 0.2426146976 - - PREDICTED: uncharacterized protein LOC105649700 [Jatropha curcas]
19 Hb_009083_060 0.2440726001 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
20 Hb_000037_210 0.2442254375 - - -

Gene co-expression network

sample Hb_152180_010 Hb_152180_010 Hb_014658_010 Hb_014658_010 Hb_152180_010--Hb_014658_010 Hb_004554_010 Hb_004554_010 Hb_152180_010--Hb_004554_010 Hb_027556_070 Hb_027556_070 Hb_152180_010--Hb_027556_070 Hb_001476_040 Hb_001476_040 Hb_152180_010--Hb_001476_040 Hb_007225_010 Hb_007225_010 Hb_152180_010--Hb_007225_010 Hb_005622_030 Hb_005622_030 Hb_152180_010--Hb_005622_030 Hb_173107_010 Hb_173107_010 Hb_014658_010--Hb_173107_010 Hb_002571_110 Hb_002571_110 Hb_014658_010--Hb_002571_110 Hb_014658_010--Hb_004554_010 Hb_014658_010--Hb_001476_040 Hb_000186_020 Hb_000186_020 Hb_014658_010--Hb_000186_020 Hb_000445_310 Hb_000445_310 Hb_004554_010--Hb_000445_310 Hb_000163_140 Hb_000163_140 Hb_004554_010--Hb_000163_140 Hb_000300_070 Hb_000300_070 Hb_004554_010--Hb_000300_070 Hb_031862_160 Hb_031862_160 Hb_004554_010--Hb_031862_160 Hb_000755_090 Hb_000755_090 Hb_027556_070--Hb_000755_090 Hb_027556_070--Hb_007225_010 Hb_158845_020 Hb_158845_020 Hb_027556_070--Hb_158845_020 Hb_000071_080 Hb_000071_080 Hb_027556_070--Hb_000071_080 Hb_003247_050 Hb_003247_050 Hb_027556_070--Hb_003247_050 Hb_145188_010 Hb_145188_010 Hb_001476_040--Hb_145188_010 Hb_000362_080 Hb_000362_080 Hb_001476_040--Hb_000362_080 Hb_009846_010 Hb_009846_010 Hb_001476_040--Hb_009846_010 Hb_007262_010 Hb_007262_010 Hb_001476_040--Hb_007262_010 Hb_004218_060 Hb_004218_060 Hb_001476_040--Hb_004218_060 Hb_001476_040--Hb_000163_140 Hb_005839_080 Hb_005839_080 Hb_007225_010--Hb_005839_080 Hb_000152_580 Hb_000152_580 Hb_007225_010--Hb_000152_580 Hb_007225_010--Hb_000163_140 Hb_008132_010 Hb_008132_010 Hb_007225_010--Hb_008132_010 Hb_007225_010--Hb_001476_040 Hb_002918_170 Hb_002918_170 Hb_007225_010--Hb_002918_170 Hb_010678_010 Hb_010678_010 Hb_005622_030--Hb_010678_010 Hb_040718_010 Hb_040718_010 Hb_005622_030--Hb_040718_010 Hb_002151_150 Hb_002151_150 Hb_005622_030--Hb_002151_150 Hb_005050_030 Hb_005050_030 Hb_005622_030--Hb_005050_030 Hb_000560_060 Hb_000560_060 Hb_005622_030--Hb_000560_060 Hb_005622_030--Hb_000755_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.869974 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.144039 0.290027

CAGE analysis