Hb_008132_010

Information

Type -
Description -
Location Contig8132: 45589-46924
Sequence    

Annotation

kegg
ID tcc:TCM_032364
description Glutathione S-transferase TAU 19
nr
ID XP_012084509.1
description PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
swissprot
ID P49332
description Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1
trembl
ID A0A067L5G6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24120 PE=3 SV=1
Gene Ontology
ID GO:0016740
description probable glutathione s-transferase parc

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008132_010 0.0 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
2 Hb_028903_010 0.1120700409 - - hypothetical protein JCGZ_09851 [Jatropha curcas]
3 Hb_000032_080 0.1203024334 transcription factor TF Family: HMG transcription factor, putative [Ricinus communis]
4 Hb_001769_150 0.1222364069 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
5 Hb_011063_030 0.1250746246 - - protein with unknown function [Ricinus communis]
6 Hb_007044_260 0.1312561854 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
7 Hb_000421_060 0.1322526541 - - PREDICTED: uncharacterized protein LOC105628158 [Jatropha curcas]
8 Hb_000664_080 0.137242318 - - PREDICTED: NADP-dependent malic enzyme isoform X2 [Jatropha curcas]
9 Hb_000358_010 0.1395755935 - - PREDICTED: basic blue protein [Populus euphratica]
10 Hb_001677_070 0.1493175581 - - PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Jatropha curcas]
11 Hb_162378_020 0.1497954901 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 13-like [Populus euphratica]
12 Hb_001235_040 0.1540052344 - - hypothetical protein POPTR_0001s47470g [Populus trichocarpa]
13 Hb_004459_030 0.1553580518 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
14 Hb_000152_580 0.1563534449 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
15 Hb_002686_070 0.1617753614 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001102_030 0.1632156075 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
17 Hb_001220_020 0.1650475939 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Jatropha curcas]
18 Hb_000227_020 0.1663287332 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
19 Hb_064396_010 0.1667718244 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_008406_150 0.1672168246 - - PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_008132_010 Hb_008132_010 Hb_028903_010 Hb_028903_010 Hb_008132_010--Hb_028903_010 Hb_000032_080 Hb_000032_080 Hb_008132_010--Hb_000032_080 Hb_001769_150 Hb_001769_150 Hb_008132_010--Hb_001769_150 Hb_011063_030 Hb_011063_030 Hb_008132_010--Hb_011063_030 Hb_007044_260 Hb_007044_260 Hb_008132_010--Hb_007044_260 Hb_000421_060 Hb_000421_060 Hb_008132_010--Hb_000421_060 Hb_028903_010--Hb_000421_060 Hb_028903_010--Hb_000032_080 Hb_008406_150 Hb_008406_150 Hb_028903_010--Hb_008406_150 Hb_002686_070 Hb_002686_070 Hb_028903_010--Hb_002686_070 Hb_005618_070 Hb_005618_070 Hb_028903_010--Hb_005618_070 Hb_001220_020 Hb_001220_020 Hb_028903_010--Hb_001220_020 Hb_162378_020 Hb_162378_020 Hb_000032_080--Hb_162378_020 Hb_000032_080--Hb_011063_030 Hb_000032_080--Hb_001220_020 Hb_064396_010 Hb_064396_010 Hb_000032_080--Hb_064396_010 Hb_000032_080--Hb_002686_070 Hb_000032_080--Hb_007044_260 Hb_000358_010 Hb_000358_010 Hb_001769_150--Hb_000358_010 Hb_036182_010 Hb_036182_010 Hb_001769_150--Hb_036182_010 Hb_006316_090 Hb_006316_090 Hb_001769_150--Hb_006316_090 Hb_001769_150--Hb_007044_260 Hb_001076_010 Hb_001076_010 Hb_001769_150--Hb_001076_010 Hb_006120_140 Hb_006120_140 Hb_001769_150--Hb_006120_140 Hb_011063_030--Hb_162378_020 Hb_001235_040 Hb_001235_040 Hb_011063_030--Hb_001235_040 Hb_011063_030--Hb_001220_020 Hb_011063_030--Hb_064396_010 Hb_000227_020 Hb_000227_020 Hb_011063_030--Hb_000227_020 Hb_007044_260--Hb_000358_010 Hb_004631_040 Hb_004631_040 Hb_007044_260--Hb_004631_040 Hb_002874_010 Hb_002874_010 Hb_007044_260--Hb_002874_010 Hb_007044_260--Hb_162378_020 Hb_007044_260--Hb_002686_070 Hb_000421_060--Hb_008406_150 Hb_000421_060--Hb_000032_080 Hb_000421_060--Hb_002686_070 Hb_000421_060--Hb_001220_020 Hb_000421_060--Hb_162378_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.24043 0.639379 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.497129 0.311977

CAGE analysis