Hb_169514_010

Information

Type -
Description -
Location Contig169514: 173-691
Sequence    

Annotation

kegg
ID pmum:103331076
description uncharacterized LOC103331076
nr
ID XP_008231914.1
description PREDICTED: uncharacterized protein LOC103331076 [Prunus mume]
swissprot
ID -
description -
trembl
ID M5VVG0
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021910mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169514_010 0.0 - - PREDICTED: uncharacterized protein LOC103331076 [Prunus mume]
2 Hb_000363_020 0.0963430191 - - metal ion binding protein, putative [Ricinus communis]
3 Hb_003376_280 0.136306576 - - ATP binding protein, putative [Ricinus communis]
4 Hb_110782_010 0.1381753458 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
5 Hb_010866_010 0.1436921984 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
6 Hb_135684_010 0.1525205606 - - hypothetical protein [Pseudomonas tolaasii]
7 Hb_002570_050 0.1582260964 - - PREDICTED: uncharacterized protein LOC104897677 [Beta vulgaris subsp. vulgaris]
8 Hb_000052_030 0.158940494 - - -
9 Hb_003927_030 0.1590826026 - - unnamed protein product [Coffea canephora]
10 Hb_169597_010 0.1597380251 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
11 Hb_093039_010 0.1600087052 - - JHL22C18.10 [Jatropha curcas]
12 Hb_000190_130 0.160607094 - - cysteine protease inhibitor [Populus tremula]
13 Hb_003780_010 0.1642769889 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000946_020 0.165107211 - - hypothetical protein PRUPE_ppa023262mg [Prunus persica]
15 Hb_000574_490 0.1658910353 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Jatropha curcas]
16 Hb_008489_010 0.1674518454 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
17 Hb_006907_110 0.1683924995 - - -
18 Hb_000575_050 0.1687002345 - - hypothetical protein CISIN_1g0468601mg, partial [Citrus sinensis]
19 Hb_021888_160 0.1695240979 - - -
20 Hb_000501_080 0.1724277873 - - hypothetical protein OsJ_22457 [Oryza sativa Japonica Group]

Gene co-expression network

sample Hb_169514_010 Hb_169514_010 Hb_000363_020 Hb_000363_020 Hb_169514_010--Hb_000363_020 Hb_003376_280 Hb_003376_280 Hb_169514_010--Hb_003376_280 Hb_110782_010 Hb_110782_010 Hb_169514_010--Hb_110782_010 Hb_010866_010 Hb_010866_010 Hb_169514_010--Hb_010866_010 Hb_135684_010 Hb_135684_010 Hb_169514_010--Hb_135684_010 Hb_002570_050 Hb_002570_050 Hb_169514_010--Hb_002570_050 Hb_000363_020--Hb_135684_010 Hb_000363_020--Hb_010866_010 Hb_000363_020--Hb_110782_010 Hb_015227_010 Hb_015227_010 Hb_000363_020--Hb_015227_010 Hb_008489_010 Hb_008489_010 Hb_000363_020--Hb_008489_010 Hb_002110_220 Hb_002110_220 Hb_003376_280--Hb_002110_220 Hb_007622_010 Hb_007622_010 Hb_003376_280--Hb_007622_010 Hb_042083_020 Hb_042083_020 Hb_003376_280--Hb_042083_020 Hb_002387_030 Hb_002387_030 Hb_003376_280--Hb_002387_030 Hb_007810_080 Hb_007810_080 Hb_003376_280--Hb_007810_080 Hb_174662_020 Hb_174662_020 Hb_003376_280--Hb_174662_020 Hb_020400_010 Hb_020400_010 Hb_110782_010--Hb_020400_010 Hb_014967_010 Hb_014967_010 Hb_110782_010--Hb_014967_010 Hb_159404_010 Hb_159404_010 Hb_110782_010--Hb_159404_010 Hb_002733_050 Hb_002733_050 Hb_110782_010--Hb_002733_050 Hb_006013_030 Hb_006013_030 Hb_110782_010--Hb_006013_030 Hb_000946_030 Hb_000946_030 Hb_010866_010--Hb_000946_030 Hb_010866_010--Hb_135684_010 Hb_010866_010--Hb_015227_010 Hb_001959_280 Hb_001959_280 Hb_010866_010--Hb_001959_280 Hb_135684_010--Hb_015227_010 Hb_135684_010--Hb_001959_280 Hb_137695_010 Hb_137695_010 Hb_135684_010--Hb_137695_010 Hb_093039_010 Hb_093039_010 Hb_002570_050--Hb_093039_010 Hb_000190_130 Hb_000190_130 Hb_002570_050--Hb_000190_130 Hb_000052_030 Hb_000052_030 Hb_002570_050--Hb_000052_030 Hb_003927_030 Hb_003927_030 Hb_002570_050--Hb_003927_030 Hb_169597_010 Hb_169597_010 Hb_002570_050--Hb_169597_010 Hb_003780_010 Hb_003780_010 Hb_002570_050--Hb_003780_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.11208 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.19041 0.980512

CAGE analysis