Hb_015227_010

Information

Type -
Description -
Location Contig15227: 450-1650
Sequence    

Annotation

kegg
ID bvg:104903465
description uncharacterized LOC104903465
nr
ID XP_010689803.1
description PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
swissprot
ID -
description -
trembl
ID E2DN01
description Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015227_010 0.0 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
2 Hb_135684_010 0.0558496631 - - hypothetical protein [Pseudomonas tolaasii]
3 Hb_001959_280 0.0679337503 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
4 Hb_137695_010 0.1097597909 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
5 Hb_002837_140 0.1258066043 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
6 Hb_010866_010 0.1374943194 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
7 Hb_000666_020 0.1382541949 - - Major latex protein, putative [Ricinus communis]
8 Hb_000363_020 0.1551821389 - - metal ion binding protein, putative [Ricinus communis]
9 Hb_008489_010 0.1644345404 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
10 Hb_115414_010 0.1715422138 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
11 Hb_055880_010 0.1758253549 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_009142_030 0.1758502735 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_001514_160 0.1758929163 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
14 Hb_014034_010 0.17608193 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_002890_050 0.176136116 - - -
16 Hb_001221_120 0.1762966659 - - cytochrome P450, putative [Ricinus communis]
17 Hb_159957_020 0.1773300207 - - -
18 Hb_000159_030 0.1775564102 - - putative glycosyltransferase, partial [Aralia elata]
19 Hb_035726_010 0.1784082476 - - Insulin-degrading enzyme, putative [Ricinus communis]
20 Hb_181968_010 0.1802657448 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]

Gene co-expression network

sample Hb_015227_010 Hb_015227_010 Hb_135684_010 Hb_135684_010 Hb_015227_010--Hb_135684_010 Hb_001959_280 Hb_001959_280 Hb_015227_010--Hb_001959_280 Hb_137695_010 Hb_137695_010 Hb_015227_010--Hb_137695_010 Hb_002837_140 Hb_002837_140 Hb_015227_010--Hb_002837_140 Hb_010866_010 Hb_010866_010 Hb_015227_010--Hb_010866_010 Hb_000666_020 Hb_000666_020 Hb_015227_010--Hb_000666_020 Hb_000363_020 Hb_000363_020 Hb_135684_010--Hb_000363_020 Hb_135684_010--Hb_001959_280 Hb_135684_010--Hb_010866_010 Hb_135684_010--Hb_137695_010 Hb_169514_010 Hb_169514_010 Hb_135684_010--Hb_169514_010 Hb_001959_280--Hb_002837_140 Hb_035726_010 Hb_035726_010 Hb_001959_280--Hb_035726_010 Hb_001959_280--Hb_010866_010 Hb_115414_010 Hb_115414_010 Hb_001959_280--Hb_115414_010 Hb_137695_010--Hb_000666_020 Hb_137695_010--Hb_002837_140 Hb_020581_020 Hb_020581_020 Hb_137695_010--Hb_020581_020 Hb_137695_010--Hb_001959_280 Hb_002837_140--Hb_000666_020 Hb_004190_010 Hb_004190_010 Hb_002837_140--Hb_004190_010 Hb_002837_140--Hb_020581_020 Hb_000946_030 Hb_000946_030 Hb_010866_010--Hb_000946_030 Hb_010866_010--Hb_000363_020 Hb_010866_010--Hb_169514_010 Hb_115007_010 Hb_115007_010 Hb_000666_020--Hb_115007_010 Hb_000046_060 Hb_000046_060 Hb_000666_020--Hb_000046_060 Hb_011282_070 Hb_011282_070 Hb_000666_020--Hb_011282_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0904882 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.08366 0.322292

CAGE analysis