Hb_002837_140

Information

Type -
Description -
Location Contig2837: 143710-153503
Sequence    

Annotation

kegg
ID pda:103721324
description LRR receptor-like serine/threonine-protein kinase EFR
nr
ID KDP38865.1
description hypothetical protein JCGZ_05022 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L2Y9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05022 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002837_140 0.0 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
2 Hb_000666_020 0.0709425008 - - Major latex protein, putative [Ricinus communis]
3 Hb_137695_010 0.0859105688 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
4 Hb_001959_280 0.1194759462 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
5 Hb_015227_010 0.1258066043 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
6 Hb_004190_010 0.1280074264 - - unnamed protein product [Vitis vinifera]
7 Hb_020581_020 0.1329678771 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
8 Hb_011282_070 0.1356423646 - - ATP binding protein, putative [Ricinus communis]
9 Hb_115007_010 0.1427391739 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_000046_060 0.1463366739 - - sugar transporter, putative [Ricinus communis]
11 Hb_000130_210 0.1486023592 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
12 Hb_021419_060 0.1487677768 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
13 Hb_135684_010 0.159140311 - - hypothetical protein [Pseudomonas tolaasii]
14 Hb_000907_190 0.1604672725 - - PREDICTED: uncharacterized protein At4g15970-like [Jatropha curcas]
15 Hb_181968_010 0.1659454513 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
16 Hb_108884_020 0.1689590288 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
17 Hb_001675_230 0.1738825512 - - scab resistance family protein [Populus trichocarpa]
18 Hb_009012_020 0.1806343587 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
19 Hb_000422_020 0.1813908475 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
20 Hb_003900_050 0.1818500519 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_002837_140 Hb_002837_140 Hb_000666_020 Hb_000666_020 Hb_002837_140--Hb_000666_020 Hb_137695_010 Hb_137695_010 Hb_002837_140--Hb_137695_010 Hb_001959_280 Hb_001959_280 Hb_002837_140--Hb_001959_280 Hb_015227_010 Hb_015227_010 Hb_002837_140--Hb_015227_010 Hb_004190_010 Hb_004190_010 Hb_002837_140--Hb_004190_010 Hb_020581_020 Hb_020581_020 Hb_002837_140--Hb_020581_020 Hb_000666_020--Hb_137695_010 Hb_115007_010 Hb_115007_010 Hb_000666_020--Hb_115007_010 Hb_000046_060 Hb_000046_060 Hb_000666_020--Hb_000046_060 Hb_000666_020--Hb_015227_010 Hb_011282_070 Hb_011282_070 Hb_000666_020--Hb_011282_070 Hb_137695_010--Hb_015227_010 Hb_135684_010 Hb_135684_010 Hb_137695_010--Hb_135684_010 Hb_137695_010--Hb_020581_020 Hb_137695_010--Hb_001959_280 Hb_001959_280--Hb_015227_010 Hb_001959_280--Hb_135684_010 Hb_035726_010 Hb_035726_010 Hb_001959_280--Hb_035726_010 Hb_010866_010 Hb_010866_010 Hb_001959_280--Hb_010866_010 Hb_115414_010 Hb_115414_010 Hb_001959_280--Hb_115414_010 Hb_015227_010--Hb_135684_010 Hb_015227_010--Hb_010866_010 Hb_000907_190 Hb_000907_190 Hb_004190_010--Hb_000907_190 Hb_004200_040 Hb_004200_040 Hb_004190_010--Hb_004200_040 Hb_000140_260 Hb_000140_260 Hb_004190_010--Hb_000140_260 Hb_003900_050 Hb_003900_050 Hb_004190_010--Hb_003900_050 Hb_012660_010 Hb_012660_010 Hb_004190_010--Hb_012660_010 Hb_004463_040 Hb_004463_040 Hb_004190_010--Hb_004463_040 Hb_181968_010 Hb_181968_010 Hb_020581_020--Hb_181968_010 Hb_000130_210 Hb_000130_210 Hb_020581_020--Hb_000130_210 Hb_020581_020--Hb_000666_020 Hb_108884_020 Hb_108884_020 Hb_020581_020--Hb_108884_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.055518 0 0.00574487 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.476584 0.0778649

CAGE analysis