Hb_181968_010

Information

Type -
Description -
Location Contig181968: 1-1304
Sequence    

Annotation

kegg
ID pvu:PHAVU_004G0480000
description hypothetical protein
nr
ID XP_012073438.1
description PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUC3
description JHL06P13.14 protein OS=Jatropha curcas GN=JHL06P13.14 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181968_010 0.0 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
2 Hb_020581_020 0.1137867318 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
3 Hb_137695_010 0.1560608193 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
4 Hb_002837_140 0.1659454513 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
5 Hb_000666_020 0.1660090565 - - Major latex protein, putative [Ricinus communis]
6 Hb_000130_210 0.1751988147 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
7 Hb_135684_010 0.1782066428 - - hypothetical protein [Pseudomonas tolaasii]
8 Hb_015227_010 0.1802657448 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
9 Hb_000046_060 0.1924506921 - - sugar transporter, putative [Ricinus communis]
10 Hb_002555_030 0.1971645362 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
11 Hb_001959_280 0.1991508381 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
12 Hb_108884_020 0.2044755946 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
13 Hb_010866_010 0.2073111871 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
14 Hb_001675_230 0.2090921357 - - scab resistance family protein [Populus trichocarpa]
15 Hb_002960_170 0.2131591894 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Jatropha curcas]
16 Hb_000177_120 0.2134826082 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
17 Hb_006651_010 0.2158993966 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
18 Hb_020581_050 0.2160162856 - - -
19 Hb_000363_020 0.2166392011 - - metal ion binding protein, putative [Ricinus communis]
20 Hb_006475_020 0.2239332108 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]

Gene co-expression network

sample Hb_181968_010 Hb_181968_010 Hb_020581_020 Hb_020581_020 Hb_181968_010--Hb_020581_020 Hb_137695_010 Hb_137695_010 Hb_181968_010--Hb_137695_010 Hb_002837_140 Hb_002837_140 Hb_181968_010--Hb_002837_140 Hb_000666_020 Hb_000666_020 Hb_181968_010--Hb_000666_020 Hb_000130_210 Hb_000130_210 Hb_181968_010--Hb_000130_210 Hb_135684_010 Hb_135684_010 Hb_181968_010--Hb_135684_010 Hb_020581_020--Hb_000130_210 Hb_020581_020--Hb_002837_140 Hb_020581_020--Hb_000666_020 Hb_108884_020 Hb_108884_020 Hb_020581_020--Hb_108884_020 Hb_020581_020--Hb_137695_010 Hb_137695_010--Hb_000666_020 Hb_137695_010--Hb_002837_140 Hb_015227_010 Hb_015227_010 Hb_137695_010--Hb_015227_010 Hb_137695_010--Hb_135684_010 Hb_001959_280 Hb_001959_280 Hb_137695_010--Hb_001959_280 Hb_002837_140--Hb_000666_020 Hb_002837_140--Hb_001959_280 Hb_002837_140--Hb_015227_010 Hb_004190_010 Hb_004190_010 Hb_002837_140--Hb_004190_010 Hb_115007_010 Hb_115007_010 Hb_000666_020--Hb_115007_010 Hb_000046_060 Hb_000046_060 Hb_000666_020--Hb_000046_060 Hb_000666_020--Hb_015227_010 Hb_011282_070 Hb_011282_070 Hb_000666_020--Hb_011282_070 Hb_000130_210--Hb_000046_060 Hb_000130_210--Hb_108884_020 Hb_000130_210--Hb_004190_010 Hb_000130_210--Hb_000666_020 Hb_000130_210--Hb_002837_140 Hb_135684_010--Hb_015227_010 Hb_000363_020 Hb_000363_020 Hb_135684_010--Hb_000363_020 Hb_135684_010--Hb_001959_280 Hb_010866_010 Hb_010866_010 Hb_135684_010--Hb_010866_010 Hb_169514_010 Hb_169514_010 Hb_135684_010--Hb_169514_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0243709 0.37459 0 0.0196303 0 0.0429867
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0439597 0 1.96623 0.536399

CAGE analysis