Hb_115007_010

Information

Type -
Description -
Location Contig115007: 49-1062
Sequence    

Annotation

kegg
ID pop:POPTR_0011s14430g
description POPTRDRAFT_888988; hypothetical protein
nr
ID XP_012071397.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KRV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05019 PE=3 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115007_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_007342_020 0.0741656149 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
3 Hb_000537_120 0.1014114357 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
4 Hb_000120_700 0.1047834392 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
5 Hb_000483_020 0.1097324042 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
6 Hb_001114_220 0.1195534973 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
7 Hb_064398_010 0.125728748 - - cytochrome P450, putative [Ricinus communis]
8 Hb_000666_020 0.1305445714 - - Major latex protein, putative [Ricinus communis]
9 Hb_022115_030 0.1307644296 - - PREDICTED: umecyanin-like [Jatropha curcas]
10 Hb_021419_060 0.1317654332 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
11 Hb_004448_030 0.1353172347 - - PREDICTED: RING-H2 finger protein ATL40-like [Jatropha curcas]
12 Hb_002900_020 0.1372476926 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
13 Hb_004592_020 0.1374980656 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
14 Hb_125644_010 0.1376708304 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
15 Hb_002837_140 0.1427391739 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
16 Hb_001442_080 0.1486655734 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
17 Hb_032717_030 0.153046148 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
18 Hb_000563_070 0.1534862773 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
19 Hb_000488_040 0.153670458 - - unnamed protein product [Vitis vinifera]
20 Hb_000487_170 0.1539987401 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_115007_010 Hb_115007_010 Hb_007342_020 Hb_007342_020 Hb_115007_010--Hb_007342_020 Hb_000537_120 Hb_000537_120 Hb_115007_010--Hb_000537_120 Hb_000120_700 Hb_000120_700 Hb_115007_010--Hb_000120_700 Hb_000483_020 Hb_000483_020 Hb_115007_010--Hb_000483_020 Hb_001114_220 Hb_001114_220 Hb_115007_010--Hb_001114_220 Hb_064398_010 Hb_064398_010 Hb_115007_010--Hb_064398_010 Hb_007342_020--Hb_000537_120 Hb_007342_020--Hb_064398_010 Hb_007342_020--Hb_001114_220 Hb_000487_170 Hb_000487_170 Hb_007342_020--Hb_000487_170 Hb_007342_020--Hb_000483_020 Hb_000537_120--Hb_001114_220 Hb_122025_010 Hb_122025_010 Hb_000537_120--Hb_122025_010 Hb_000563_070 Hb_000563_070 Hb_000537_120--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_000537_120--Hb_000264_250 Hb_002551_010 Hb_002551_010 Hb_000537_120--Hb_002551_010 Hb_004592_020 Hb_004592_020 Hb_000537_120--Hb_004592_020 Hb_022115_030 Hb_022115_030 Hb_000120_700--Hb_022115_030 Hb_023732_020 Hb_023732_020 Hb_000120_700--Hb_023732_020 Hb_032717_030 Hb_032717_030 Hb_000120_700--Hb_032717_030 Hb_004448_030 Hb_004448_030 Hb_000120_700--Hb_004448_030 Hb_003073_020 Hb_003073_020 Hb_000120_700--Hb_003073_020 Hb_002900_020 Hb_002900_020 Hb_000483_020--Hb_002900_020 Hb_000483_020--Hb_004592_020 Hb_000488_040 Hb_000488_040 Hb_000483_020--Hb_000488_040 Hb_001442_080 Hb_001442_080 Hb_000483_020--Hb_001442_080 Hb_000483_020--Hb_032717_030 Hb_178389_020 Hb_178389_020 Hb_000483_020--Hb_178389_020 Hb_001114_220--Hb_002551_010 Hb_001114_220--Hb_000264_250 Hb_106528_010 Hb_106528_010 Hb_001114_220--Hb_106528_010 Hb_005747_040 Hb_005747_040 Hb_001114_220--Hb_005747_040 Hb_001114_220--Hb_000563_070 Hb_010712_020 Hb_010712_020 Hb_064398_010--Hb_010712_020 Hb_001863_290 Hb_001863_290 Hb_064398_010--Hb_001863_290 Hb_064398_010--Hb_001442_080 Hb_064398_010--Hb_000487_170 Hb_001141_170 Hb_001141_170 Hb_064398_010--Hb_001141_170 Hb_107258_010 Hb_107258_010 Hb_064398_010--Hb_107258_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.156059 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.4961 0.0802199

CAGE analysis