Hb_137695_010

Information

Type -
Description -
Location Contig137695: 1084-3998
Sequence    

Annotation

kegg
ID mdm:103452204
description wall-associated receptor kinase 2-like
nr
ID XP_008389950.1
description PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
swissprot
ID Q9LSV3
description Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1
trembl
ID A0A061FIF5
description Wall-associated kinase 2, putative OS=Theobroma cacao GN=TCM_035270 PE=3 SV=1
Gene Ontology
ID GO:0004672
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137695_010 0.0 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
2 Hb_000666_020 0.0674270156 - - Major latex protein, putative [Ricinus communis]
3 Hb_002837_140 0.0859105688 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
4 Hb_015227_010 0.1097597909 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
5 Hb_135684_010 0.1280752923 - - hypothetical protein [Pseudomonas tolaasii]
6 Hb_020581_020 0.1448531538 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
7 Hb_001959_280 0.1462671953 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
8 Hb_181968_010 0.1560608193 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
9 Hb_115007_010 0.1607039124 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_000046_060 0.1625407406 - - sugar transporter, putative [Ricinus communis]
11 Hb_000130_210 0.1649523162 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
12 Hb_001675_230 0.1650731181 - - scab resistance family protein [Populus trichocarpa]
13 Hb_108884_020 0.1694597194 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
14 Hb_004190_010 0.1807289004 - - unnamed protein product [Vitis vinifera]
15 Hb_011282_070 0.1818495657 - - ATP binding protein, putative [Ricinus communis]
16 Hb_007342_020 0.1884399373 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
17 Hb_021419_060 0.1887767964 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
18 Hb_009012_020 0.1960118214 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
19 Hb_006475_020 0.1969395664 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
20 Hb_000363_020 0.2025422998 - - metal ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_137695_010 Hb_137695_010 Hb_000666_020 Hb_000666_020 Hb_137695_010--Hb_000666_020 Hb_002837_140 Hb_002837_140 Hb_137695_010--Hb_002837_140 Hb_015227_010 Hb_015227_010 Hb_137695_010--Hb_015227_010 Hb_135684_010 Hb_135684_010 Hb_137695_010--Hb_135684_010 Hb_020581_020 Hb_020581_020 Hb_137695_010--Hb_020581_020 Hb_001959_280 Hb_001959_280 Hb_137695_010--Hb_001959_280 Hb_000666_020--Hb_002837_140 Hb_115007_010 Hb_115007_010 Hb_000666_020--Hb_115007_010 Hb_000046_060 Hb_000046_060 Hb_000666_020--Hb_000046_060 Hb_000666_020--Hb_015227_010 Hb_011282_070 Hb_011282_070 Hb_000666_020--Hb_011282_070 Hb_002837_140--Hb_001959_280 Hb_002837_140--Hb_015227_010 Hb_004190_010 Hb_004190_010 Hb_002837_140--Hb_004190_010 Hb_002837_140--Hb_020581_020 Hb_015227_010--Hb_135684_010 Hb_015227_010--Hb_001959_280 Hb_010866_010 Hb_010866_010 Hb_015227_010--Hb_010866_010 Hb_000363_020 Hb_000363_020 Hb_135684_010--Hb_000363_020 Hb_135684_010--Hb_001959_280 Hb_135684_010--Hb_010866_010 Hb_169514_010 Hb_169514_010 Hb_135684_010--Hb_169514_010 Hb_181968_010 Hb_181968_010 Hb_020581_020--Hb_181968_010 Hb_000130_210 Hb_000130_210 Hb_020581_020--Hb_000130_210 Hb_020581_020--Hb_000666_020 Hb_108884_020 Hb_108884_020 Hb_020581_020--Hb_108884_020 Hb_035726_010 Hb_035726_010 Hb_001959_280--Hb_035726_010 Hb_001959_280--Hb_010866_010 Hb_115414_010 Hb_115414_010 Hb_001959_280--Hb_115414_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0712257 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.429009 0.0868319

CAGE analysis