Hb_033908_010

Information

Type -
Description -
Location Contig33908: 11507-13369
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033908_010 0.0 - - -
2 Hb_087161_010 0.175894571 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_069147_010 0.2278170063 desease resistance Gene Name: zf-BED PREDICTED: probable disease resistance protein At4g27220 isoform X1 [Populus euphratica]
4 Hb_041813_050 0.2334210386 - - hypothetical protein NitaMp096 [Nicotiana tabacum]
5 Hb_004052_060 0.2344744568 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
6 Hb_030885_010 0.2377753331 - - -
7 Hb_076226_010 0.2381741605 - - hypothetical protein VITISV_030432 [Vitis vinifera]
8 Hb_095835_010 0.2389907464 - - hypothetical protein JCGZ_23410 [Jatropha curcas]
9 Hb_000832_350 0.2397203928 - - Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative [Ricinus communis]
10 Hb_128531_010 0.2479809131 - - phosphoprotein phosphatase, putative [Ricinus communis]
11 Hb_003375_050 0.2492872153 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_003362_020 0.2520369513 - - PREDICTED: uncharacterized protein LOC104098435, partial [Nicotiana tomentosiformis]
13 Hb_185058_020 0.2599875019 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
14 Hb_008055_030 0.2620862321 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
15 Hb_005465_050 0.2632706195 - - PREDICTED: uncharacterized protein LOC105635964 [Jatropha curcas]
16 Hb_056506_090 0.2633397679 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
17 Hb_153924_010 0.2633607088 - - hypothetical protein JCGZ_22941 [Jatropha curcas]
18 Hb_105251_010 0.2634034796 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_003793_040 0.2634566474 - - hypothetical protein CARUB_v10021783mg [Capsella rubella]
20 Hb_001102_280 0.2635112993 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_033908_010 Hb_033908_010 Hb_087161_010 Hb_087161_010 Hb_033908_010--Hb_087161_010 Hb_069147_010 Hb_069147_010 Hb_033908_010--Hb_069147_010 Hb_041813_050 Hb_041813_050 Hb_033908_010--Hb_041813_050 Hb_004052_060 Hb_004052_060 Hb_033908_010--Hb_004052_060 Hb_030885_010 Hb_030885_010 Hb_033908_010--Hb_030885_010 Hb_076226_010 Hb_076226_010 Hb_033908_010--Hb_076226_010 Hb_087161_010--Hb_030885_010 Hb_009848_060 Hb_009848_060 Hb_087161_010--Hb_009848_060 Hb_087161_010--Hb_004052_060 Hb_087161_010--Hb_041813_050 Hb_008055_030 Hb_008055_030 Hb_087161_010--Hb_008055_030 Hb_069147_010--Hb_004052_060 Hb_069147_010--Hb_009848_060 Hb_000414_180 Hb_000414_180 Hb_069147_010--Hb_000414_180 Hb_185058_020 Hb_185058_020 Hb_069147_010--Hb_185058_020 Hb_069147_010--Hb_041813_050 Hb_044380_020 Hb_044380_020 Hb_069147_010--Hb_044380_020 Hb_062192_060 Hb_062192_060 Hb_041813_050--Hb_062192_060 Hb_005154_090 Hb_005154_090 Hb_041813_050--Hb_005154_090 Hb_003375_050 Hb_003375_050 Hb_041813_050--Hb_003375_050 Hb_041813_010 Hb_041813_010 Hb_041813_050--Hb_041813_010 Hb_012092_080 Hb_012092_080 Hb_041813_050--Hb_012092_080 Hb_041813_050--Hb_185058_020 Hb_004052_060--Hb_009848_060 Hb_125116_020 Hb_125116_020 Hb_004052_060--Hb_125116_020 Hb_095835_010 Hb_095835_010 Hb_004052_060--Hb_095835_010 Hb_010129_020 Hb_010129_020 Hb_004052_060--Hb_010129_020 Hb_005843_060 Hb_005843_060 Hb_004052_060--Hb_005843_060 Hb_029727_010 Hb_029727_010 Hb_004052_060--Hb_029727_010 Hb_030885_010--Hb_009848_060 Hb_030885_010--Hb_010129_020 Hb_001856_280 Hb_001856_280 Hb_030885_010--Hb_001856_280 Hb_030885_010--Hb_029727_010 Hb_030885_010--Hb_125116_020 Hb_002529_070 Hb_002529_070 Hb_030885_010--Hb_002529_070 Hb_076226_010--Hb_069147_010 Hb_001799_220 Hb_001799_220 Hb_076226_010--Hb_001799_220 Hb_092650_010 Hb_092650_010 Hb_076226_010--Hb_092650_010 Hb_076226_010--Hb_030885_010 Hb_076226_010--Hb_087161_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0571718 0.0239507 0.0215142 0.100509 0.227744 0.178653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0657417 0.0516939 0.187353 1.75641 4.26283

CAGE analysis