Hb_087161_010

Information

Type -
Description -
Location Contig87161: 77-621
Sequence    

Annotation

kegg
ID rcu:RCOM_0666870
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002533665.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q05091
description Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1
trembl
ID B9T5Z6
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0666870 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_087161_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_033908_010 0.175894571 - - -
3 Hb_030885_010 0.1891829362 - - -
4 Hb_009848_060 0.2010645806 - - unknown [Glycine max]
5 Hb_004052_060 0.2058836784 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
6 Hb_041813_050 0.206273284 - - hypothetical protein NitaMp096 [Nicotiana tabacum]
7 Hb_008055_030 0.2067659048 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
8 Hb_009848_050 0.2092480517 - - PREDICTED: proline-rich receptor-like protein kinase PERK13 [Elaeis guineensis]
9 Hb_185058_020 0.2119029121 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
10 Hb_069147_010 0.2142626682 desease resistance Gene Name: zf-BED PREDICTED: probable disease resistance protein At4g27220 isoform X1 [Populus euphratica]
11 Hb_095835_010 0.2173518745 - - hypothetical protein JCGZ_23410 [Jatropha curcas]
12 Hb_128531_010 0.2189084561 - - phosphoprotein phosphatase, putative [Ricinus communis]
13 Hb_010129_020 0.2215789828 - - cytochrome P450, putative [Ricinus communis]
14 Hb_010810_070 0.2275412348 - - serine/threonine kinase, putative [Ricinus communis]
15 Hb_001880_020 0.2282739377 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
16 Hb_000167_070 0.229917072 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
17 Hb_094002_010 0.2303829735 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
18 Hb_004520_010 0.233735507 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
19 Hb_002090_010 0.2345896605 - - gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
20 Hb_001856_280 0.2350866605 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]

Gene co-expression network

sample Hb_087161_010 Hb_087161_010 Hb_033908_010 Hb_033908_010 Hb_087161_010--Hb_033908_010 Hb_030885_010 Hb_030885_010 Hb_087161_010--Hb_030885_010 Hb_009848_060 Hb_009848_060 Hb_087161_010--Hb_009848_060 Hb_004052_060 Hb_004052_060 Hb_087161_010--Hb_004052_060 Hb_041813_050 Hb_041813_050 Hb_087161_010--Hb_041813_050 Hb_008055_030 Hb_008055_030 Hb_087161_010--Hb_008055_030 Hb_069147_010 Hb_069147_010 Hb_033908_010--Hb_069147_010 Hb_033908_010--Hb_041813_050 Hb_033908_010--Hb_004052_060 Hb_033908_010--Hb_030885_010 Hb_076226_010 Hb_076226_010 Hb_033908_010--Hb_076226_010 Hb_030885_010--Hb_009848_060 Hb_010129_020 Hb_010129_020 Hb_030885_010--Hb_010129_020 Hb_001856_280 Hb_001856_280 Hb_030885_010--Hb_001856_280 Hb_029727_010 Hb_029727_010 Hb_030885_010--Hb_029727_010 Hb_125116_020 Hb_125116_020 Hb_030885_010--Hb_125116_020 Hb_002529_070 Hb_002529_070 Hb_030885_010--Hb_002529_070 Hb_000260_730 Hb_000260_730 Hb_009848_060--Hb_000260_730 Hb_002016_130 Hb_002016_130 Hb_009848_060--Hb_002016_130 Hb_009848_060--Hb_004052_060 Hb_009848_050 Hb_009848_050 Hb_009848_060--Hb_009848_050 Hb_000574_030 Hb_000574_030 Hb_009848_060--Hb_000574_030 Hb_004052_060--Hb_125116_020 Hb_095835_010 Hb_095835_010 Hb_004052_060--Hb_095835_010 Hb_004052_060--Hb_010129_020 Hb_005843_060 Hb_005843_060 Hb_004052_060--Hb_005843_060 Hb_004052_060--Hb_029727_010 Hb_062192_060 Hb_062192_060 Hb_041813_050--Hb_062192_060 Hb_005154_090 Hb_005154_090 Hb_041813_050--Hb_005154_090 Hb_003375_050 Hb_003375_050 Hb_041813_050--Hb_003375_050 Hb_041813_010 Hb_041813_010 Hb_041813_050--Hb_041813_010 Hb_012092_080 Hb_012092_080 Hb_041813_050--Hb_012092_080 Hb_185058_020 Hb_185058_020 Hb_041813_050--Hb_185058_020 Hb_005920_030 Hb_005920_030 Hb_008055_030--Hb_005920_030 Hb_008055_030--Hb_001856_280 Hb_007885_110 Hb_007885_110 Hb_008055_030--Hb_007885_110 Hb_043792_030 Hb_043792_030 Hb_008055_030--Hb_043792_030 Hb_019654_170 Hb_019654_170 Hb_008055_030--Hb_019654_170 Hb_004520_010 Hb_004520_010 Hb_008055_030--Hb_004520_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.31158 0.339905 0.388259 0.133087 0.0734274 0.480388
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.46895 4.67642 10.053

CAGE analysis