Hb_000732_080

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig732: 94938-96167
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023411mg
description hypothetical protein
nr
ID XP_012091464.1
description PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
swissprot
ID Q84WD3
description Probable disease resistance protein At4g19060 OS=Arabidopsis thaliana GN=At4g19060 PE=2 SV=2
trembl
ID A0A067JLH7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21336 PE=4 SV=1
Gene Ontology
ID GO:0005525
description probable disease resistance protein at5g45490

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56113: 94838-96239
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_080 0.0 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
2 Hb_103788_010 0.1267059968 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
3 Hb_089100_040 0.1281615001 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
4 Hb_004162_120 0.1310430353 - - PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Populus euphratica]
5 Hb_006054_030 0.13156105 - - PREDICTED: protein GPR107-like [Jatropha curcas]
6 Hb_080451_010 0.1323679072 - - PREDICTED: ankyrin repeat-containing protein At2g01680 [Jatropha curcas]
7 Hb_005096_010 0.1345588532 - - PREDICTED: uncharacterized protein LOC105641403 [Jatropha curcas]
8 Hb_000216_020 0.1346098154 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
9 Hb_000069_780 0.1378642112 - - atpob1, putative [Ricinus communis]
10 Hb_009193_110 0.1437554611 - - PREDICTED: wall-associated receptor kinase-like 1 isoform X1 [Jatropha curcas]
11 Hb_000331_280 0.1442025388 - - AMP dependent CoA ligase, putative [Ricinus communis]
12 Hb_005203_020 0.1442115435 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
13 Hb_000270_230 0.1461154595 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
14 Hb_000371_060 0.1474449393 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
15 Hb_003752_120 0.1478159411 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
16 Hb_000107_560 0.1516514914 - - glutamate receptor 3 plant, putative [Ricinus communis]
17 Hb_000010_350 0.1518464579 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
18 Hb_138585_100 0.1529340297 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
19 Hb_001865_060 0.1529425839 - - PREDICTED: uncharacterized protein LOC105647962 [Jatropha curcas]
20 Hb_000362_090 0.1533243393 - - PREDICTED: uncharacterized protein LOC105635736 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000732_080 Hb_000732_080 Hb_103788_010 Hb_103788_010 Hb_000732_080--Hb_103788_010 Hb_089100_040 Hb_089100_040 Hb_000732_080--Hb_089100_040 Hb_004162_120 Hb_004162_120 Hb_000732_080--Hb_004162_120 Hb_006054_030 Hb_006054_030 Hb_000732_080--Hb_006054_030 Hb_080451_010 Hb_080451_010 Hb_000732_080--Hb_080451_010 Hb_005096_010 Hb_005096_010 Hb_000732_080--Hb_005096_010 Hb_003637_020 Hb_003637_020 Hb_103788_010--Hb_003637_020 Hb_003752_120 Hb_003752_120 Hb_103788_010--Hb_003752_120 Hb_002915_070 Hb_002915_070 Hb_103788_010--Hb_002915_070 Hb_185513_010 Hb_185513_010 Hb_103788_010--Hb_185513_010 Hb_103788_010--Hb_006054_030 Hb_000189_470 Hb_000189_470 Hb_089100_040--Hb_000189_470 Hb_000866_370 Hb_000866_370 Hb_089100_040--Hb_000866_370 Hb_000362_090 Hb_000362_090 Hb_089100_040--Hb_000362_090 Hb_009897_010 Hb_009897_010 Hb_089100_040--Hb_009897_010 Hb_000216_020 Hb_000216_020 Hb_089100_040--Hb_000216_020 Hb_065500_030 Hb_065500_030 Hb_089100_040--Hb_065500_030 Hb_004162_120--Hb_065500_030 Hb_000751_140 Hb_000751_140 Hb_004162_120--Hb_000751_140 Hb_000917_100 Hb_000917_100 Hb_004162_120--Hb_000917_100 Hb_000197_030 Hb_000197_030 Hb_004162_120--Hb_000197_030 Hb_004162_120--Hb_080451_010 Hb_002005_120 Hb_002005_120 Hb_004162_120--Hb_002005_120 Hb_000941_080 Hb_000941_080 Hb_006054_030--Hb_000941_080 Hb_001369_780 Hb_001369_780 Hb_006054_030--Hb_001369_780 Hb_000069_780 Hb_000069_780 Hb_006054_030--Hb_000069_780 Hb_001410_130 Hb_001410_130 Hb_006054_030--Hb_001410_130 Hb_000270_230 Hb_000270_230 Hb_006054_030--Hb_000270_230 Hb_000460_060 Hb_000460_060 Hb_006054_030--Hb_000460_060 Hb_012239_030 Hb_012239_030 Hb_080451_010--Hb_012239_030 Hb_000107_560 Hb_000107_560 Hb_080451_010--Hb_000107_560 Hb_080451_010--Hb_065500_030 Hb_000979_240 Hb_000979_240 Hb_080451_010--Hb_000979_240 Hb_001205_110 Hb_001205_110 Hb_080451_010--Hb_001205_110 Hb_005725_060 Hb_005725_060 Hb_005096_010--Hb_005725_060 Hb_006711_070 Hb_006711_070 Hb_005096_010--Hb_006711_070 Hb_005096_010--Hb_006054_030 Hb_055488_020 Hb_055488_020 Hb_005096_010--Hb_055488_020 Hb_004218_090 Hb_004218_090 Hb_005096_010--Hb_004218_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.07384 55.0613 8.10569 24.8482 15.5875 7.25186
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.18456 3.62548 4.04012 16.018 6.99959

CAGE analysis