Hb_000661_080

Information

Type -
Description -
Location Contig661: 63468-66192
Sequence    

Annotation

kegg
ID rcu:RCOM_1020470
description monoxygenase, putative
nr
ID XP_002518129.1
description monoxygenase, putative [Ricinus communis]
swissprot
ID P25535
description 2-octaprenylphenol hydroxylase OS=Escherichia coli (strain K12) GN=ubiI PE=1 SV=2
trembl
ID B9RWL0
description Monoxygenase, putative OS=Ricinus communis GN=RCOM_1020470 PE=4 SV=1
Gene Ontology
ID GO:0016709
description fad nad -binding oxidoreductase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_080 0.0 - - monoxygenase, putative [Ricinus communis]
2 Hb_004445_020 0.1817874815 - - hypothetical protein JCGZ_13166 [Jatropha curcas]
3 Hb_000795_060 0.183764301 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase acetyl-CoA C-acetyltransferase [Hevea brasiliensis]
4 Hb_000258_140 0.1892662629 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001490_030 0.1914877711 - - PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas]
6 Hb_001454_260 0.1922193903 - - hypothetical protein RCOM_0681280 [Ricinus communis]
7 Hb_000084_200 0.1966475356 - - PREDICTED: uncharacterized protein LOC105634688 isoform X2 [Jatropha curcas]
8 Hb_007973_010 0.1970574515 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
9 Hb_026745_020 0.200323788 - - PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Jatropha curcas]
10 Hb_001951_180 0.2005706192 - - PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [Jatropha curcas]
11 Hb_005701_060 0.2039658523 - - hypothetical protein JCGZ_04513 [Jatropha curcas]
12 Hb_002304_020 0.2072558134 - - -
13 Hb_000193_270 0.2079181319 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR1 isoform X1 [Jatropha curcas]
14 Hb_000289_110 0.2082155732 - - PREDICTED: cysteine synthase-like [Musa acuminata subsp. malaccensis]
15 Hb_000703_270 0.2088294593 - - hypothetical protein B456_012G039600 [Gossypium raimondii]
16 Hb_017987_030 0.2103697935 - - PREDICTED: uncharacterized protein LOC105630796 [Jatropha curcas]
17 Hb_153533_010 0.210658366 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X3 [Jatropha curcas]
18 Hb_008447_040 0.2112083536 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
19 Hb_004785_080 0.2118774269 - - hypothetical protein POPTR_0005s21250g [Populus trichocarpa]
20 Hb_012627_040 0.2127685771 - - PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]

Gene co-expression network

sample Hb_000661_080 Hb_000661_080 Hb_004445_020 Hb_004445_020 Hb_000661_080--Hb_004445_020 Hb_000795_060 Hb_000795_060 Hb_000661_080--Hb_000795_060 Hb_000258_140 Hb_000258_140 Hb_000661_080--Hb_000258_140 Hb_001490_030 Hb_001490_030 Hb_000661_080--Hb_001490_030 Hb_001454_260 Hb_001454_260 Hb_000661_080--Hb_001454_260 Hb_000084_200 Hb_000084_200 Hb_000661_080--Hb_000084_200 Hb_005078_010 Hb_005078_010 Hb_004445_020--Hb_005078_010 Hb_004445_020--Hb_000084_200 Hb_138781_010 Hb_138781_010 Hb_004445_020--Hb_138781_010 Hb_003030_030 Hb_003030_030 Hb_004445_020--Hb_003030_030 Hb_032920_050 Hb_032920_050 Hb_004445_020--Hb_032920_050 Hb_026745_020 Hb_026745_020 Hb_004445_020--Hb_026745_020 Hb_000795_060--Hb_001454_260 Hb_000003_080 Hb_000003_080 Hb_000795_060--Hb_000003_080 Hb_001842_100 Hb_001842_100 Hb_000795_060--Hb_001842_100 Hb_010423_040 Hb_010423_040 Hb_000795_060--Hb_010423_040 Hb_000272_020 Hb_000272_020 Hb_000795_060--Hb_000272_020 Hb_001421_060 Hb_001421_060 Hb_000795_060--Hb_001421_060 Hb_000661_070 Hb_000661_070 Hb_000258_140--Hb_000661_070 Hb_000347_330 Hb_000347_330 Hb_000258_140--Hb_000347_330 Hb_000212_290 Hb_000212_290 Hb_000258_140--Hb_000212_290 Hb_009680_020 Hb_009680_020 Hb_000258_140--Hb_009680_020 Hb_007973_010 Hb_007973_010 Hb_000258_140--Hb_007973_010 Hb_019040_030 Hb_019040_030 Hb_000258_140--Hb_019040_030 Hb_003813_020 Hb_003813_020 Hb_001490_030--Hb_003813_020 Hb_000622_240 Hb_000622_240 Hb_001490_030--Hb_000622_240 Hb_001712_020 Hb_001712_020 Hb_001490_030--Hb_001712_020 Hb_000107_570 Hb_000107_570 Hb_001490_030--Hb_000107_570 Hb_004241_020 Hb_004241_020 Hb_001490_030--Hb_004241_020 Hb_000156_210 Hb_000156_210 Hb_001490_030--Hb_000156_210 Hb_003581_100 Hb_003581_100 Hb_001454_260--Hb_003581_100 Hb_033153_090 Hb_033153_090 Hb_001454_260--Hb_033153_090 Hb_001454_260--Hb_001421_060 Hb_011781_030 Hb_011781_030 Hb_001454_260--Hb_011781_030 Hb_005400_030 Hb_005400_030 Hb_001454_260--Hb_005400_030 Hb_005015_060 Hb_005015_060 Hb_000084_200--Hb_005015_060 Hb_001014_110 Hb_001014_110 Hb_000084_200--Hb_001014_110 Hb_004724_460 Hb_004724_460 Hb_000084_200--Hb_004724_460 Hb_000608_380 Hb_000608_380 Hb_000084_200--Hb_000608_380 Hb_005701_060 Hb_005701_060 Hb_000084_200--Hb_005701_060 Hb_000599_200 Hb_000599_200 Hb_000084_200--Hb_000599_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.319494 0.156399 0.0909639 0.232511 0.038609 0.630783
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.533124 0.488904 0.123633 0.370576 0.821643

CAGE analysis