Hb_000579_030

Information

Type transcription factor
Description TF Family: HB
Location Contig579: 68510-77828
Sequence    

Annotation

kegg
ID rcu:RCOM_1595770
description bel1 homeotic protein, putative
nr
ID XP_012071936.1
description PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
swissprot
ID Q9FWS9
description BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1
trembl
ID A0A067L243
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04485 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49761: 68244-68972 , PASA_asmbl_49762: 69144-69495 , PASA_asmbl_49764: 72814-77500
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000579_030 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
2 Hb_004116_180 0.1061523474 - - PREDICTED: uncharacterized protein LOC105646147 [Jatropha curcas]
3 Hb_001269_050 0.1337456125 - - PREDICTED: F-box/LRR-repeat protein 4 [Jatropha curcas]
4 Hb_000473_120 0.1351691505 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
5 Hb_000492_080 0.1407798759 - - PREDICTED: probable sucrose-phosphate synthase 1 [Jatropha curcas]
6 Hb_023765_010 0.1448302677 - - calcineurin-like phosphoesterase [Manihot esculenta]
7 Hb_001446_060 0.1460340604 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
8 Hb_033152_100 0.1495949195 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_011828_010 0.1521011932 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
10 Hb_014720_030 0.1561401808 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0012s08280g [Populus trichocarpa]
11 Hb_004875_010 0.1572704173 - - plasma membrane aquaporin 1 [Hevea brasiliensis]
12 Hb_000920_290 0.1587232217 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_005000_090 0.1617834563 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
14 Hb_002559_030 0.1654027114 - - oxidoreductase, putative [Ricinus communis]
15 Hb_000056_010 0.1661207636 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
16 Hb_000922_220 0.1671911005 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
17 Hb_002289_150 0.1683068172 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
18 Hb_004013_020 0.1691670188 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
19 Hb_001898_020 0.1694748831 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
20 Hb_155150_010 0.1697376627 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000579_030 Hb_000579_030 Hb_004116_180 Hb_004116_180 Hb_000579_030--Hb_004116_180 Hb_001269_050 Hb_001269_050 Hb_000579_030--Hb_001269_050 Hb_000473_120 Hb_000473_120 Hb_000579_030--Hb_000473_120 Hb_000492_080 Hb_000492_080 Hb_000579_030--Hb_000492_080 Hb_023765_010 Hb_023765_010 Hb_000579_030--Hb_023765_010 Hb_001446_060 Hb_001446_060 Hb_000579_030--Hb_001446_060 Hb_001673_060 Hb_001673_060 Hb_004116_180--Hb_001673_060 Hb_033152_100 Hb_033152_100 Hb_004116_180--Hb_033152_100 Hb_001226_110 Hb_001226_110 Hb_004116_180--Hb_001226_110 Hb_000920_290 Hb_000920_290 Hb_004116_180--Hb_000920_290 Hb_000340_080 Hb_000340_080 Hb_004116_180--Hb_000340_080 Hb_001269_050--Hb_000492_080 Hb_014720_030 Hb_014720_030 Hb_001269_050--Hb_014720_030 Hb_001998_220 Hb_001998_220 Hb_001269_050--Hb_001998_220 Hb_013405_180 Hb_013405_180 Hb_001269_050--Hb_013405_180 Hb_011616_040 Hb_011616_040 Hb_001269_050--Hb_011616_040 Hb_001054_120 Hb_001054_120 Hb_001269_050--Hb_001054_120 Hb_031089_050 Hb_031089_050 Hb_000473_120--Hb_031089_050 Hb_011828_010 Hb_011828_010 Hb_000473_120--Hb_011828_010 Hb_000473_120--Hb_001998_220 Hb_020805_120 Hb_020805_120 Hb_000473_120--Hb_020805_120 Hb_003006_080 Hb_003006_080 Hb_000473_120--Hb_003006_080 Hb_002311_130 Hb_002311_130 Hb_000473_120--Hb_002311_130 Hb_005000_090 Hb_005000_090 Hb_000492_080--Hb_005000_090 Hb_000492_080--Hb_001998_220 Hb_000445_130 Hb_000445_130 Hb_000492_080--Hb_000445_130 Hb_001366_270 Hb_001366_270 Hb_000492_080--Hb_001366_270 Hb_001341_010 Hb_001341_010 Hb_000492_080--Hb_001341_010 Hb_000674_010 Hb_000674_010 Hb_023765_010--Hb_000674_010 Hb_023765_010--Hb_005000_090 Hb_002072_010 Hb_002072_010 Hb_023765_010--Hb_002072_010 Hb_002400_060 Hb_002400_060 Hb_023765_010--Hb_002400_060 Hb_028077_020 Hb_028077_020 Hb_023765_010--Hb_028077_020 Hb_002367_110 Hb_002367_110 Hb_023765_010--Hb_002367_110 Hb_001898_020 Hb_001898_020 Hb_001446_060--Hb_001898_020 Hb_001446_060--Hb_005000_090 Hb_001430_100 Hb_001430_100 Hb_001446_060--Hb_001430_100 Hb_155150_010 Hb_155150_010 Hb_001446_060--Hb_155150_010 Hb_102763_010 Hb_102763_010 Hb_001446_060--Hb_102763_010 Hb_001446_060--Hb_000492_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.68681 17.7835 4.02141 19.791 5.71214 5.8862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.3499 0.787248 1.47358 5.44226 17.7794

CAGE analysis