Hb_000389_070

Information

Type -
Description -
Location Contig389: 164535-175491
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000389_070 0.0 - - -
2 Hb_000671_180 0.1858273476 - - RING zinc finger protein, putative [Arabidopsis thaliana]
3 Hb_003368_130 0.308569076 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
4 Hb_000215_170 0.3133967723 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
5 Hb_004903_010 0.3900163881 - - -
6 Hb_171276_010 0.4055908561 - - -
7 Hb_000174_010 0.413132832 - - PREDICTED: uncharacterized protein LOC103444904 [Malus domestica]
8 Hb_061390_010 0.4151959709 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
9 Hb_008880_010 0.4151960057 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
10 Hb_115350_010 0.4151981055 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_002779_020 0.4151996182 - - transcription factor, putative [Ricinus communis]
12 Hb_136696_010 0.4152034956 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
13 Hb_068804_160 0.4154326573 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
14 Hb_000350_110 0.4190830571 - - PREDICTED: uncharacterized protein LOC104220461 isoform X2 [Nicotiana sylvestris]
15 Hb_004304_050 0.4310506038 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
16 Hb_005183_160 0.4321521178 - - -
17 Hb_003918_040 0.4337757669 - - -
18 Hb_000317_300 0.4389938537 - - -
19 Hb_000281_160 0.4405486643 - - PREDICTED: cytochrome P450 716B2-like isoform X2 [Glycine max]
20 Hb_001798_050 0.4484895428 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]

Gene co-expression network

sample Hb_000389_070 Hb_000389_070 Hb_000671_180 Hb_000671_180 Hb_000389_070--Hb_000671_180 Hb_003368_130 Hb_003368_130 Hb_000389_070--Hb_003368_130 Hb_000215_170 Hb_000215_170 Hb_000389_070--Hb_000215_170 Hb_004903_010 Hb_004903_010 Hb_000389_070--Hb_004903_010 Hb_171276_010 Hb_171276_010 Hb_000389_070--Hb_171276_010 Hb_000174_010 Hb_000174_010 Hb_000389_070--Hb_000174_010 Hb_000671_180--Hb_004903_010 Hb_019863_020 Hb_019863_020 Hb_000671_180--Hb_019863_020 Hb_070268_010 Hb_070268_010 Hb_000671_180--Hb_070268_010 Hb_006775_050 Hb_006775_050 Hb_000671_180--Hb_006775_050 Hb_000179_160 Hb_000179_160 Hb_000671_180--Hb_000179_160 Hb_003368_130--Hb_000215_170 Hb_000317_300 Hb_000317_300 Hb_003368_130--Hb_000317_300 Hb_019093_010 Hb_019093_010 Hb_003368_130--Hb_019093_010 Hb_000069_680 Hb_000069_680 Hb_003368_130--Hb_000069_680 Hb_006775_010 Hb_006775_010 Hb_003368_130--Hb_006775_010 Hb_003918_040 Hb_003918_040 Hb_000215_170--Hb_003918_040 Hb_005183_160 Hb_005183_160 Hb_000215_170--Hb_005183_160 Hb_004304_050 Hb_004304_050 Hb_000215_170--Hb_004304_050 Hb_008880_010 Hb_008880_010 Hb_000215_170--Hb_008880_010 Hb_061390_010 Hb_061390_010 Hb_000215_170--Hb_061390_010 Hb_034454_020 Hb_034454_020 Hb_004903_010--Hb_034454_020 Hb_049901_010 Hb_049901_010 Hb_004903_010--Hb_049901_010 Hb_007218_030 Hb_007218_030 Hb_004903_010--Hb_007218_030 Hb_004903_010--Hb_000179_160 Hb_000425_050 Hb_000425_050 Hb_004903_010--Hb_000425_050 Hb_009563_020 Hb_009563_020 Hb_004903_010--Hb_009563_020 Hb_002855_020 Hb_002855_020 Hb_171276_010--Hb_002855_020 Hb_087388_010 Hb_087388_010 Hb_171276_010--Hb_087388_010 Hb_000170_180 Hb_000170_180 Hb_171276_010--Hb_000170_180 Hb_008453_040 Hb_008453_040 Hb_171276_010--Hb_008453_040 Hb_004208_020 Hb_004208_020 Hb_171276_010--Hb_004208_020 Hb_121921_010 Hb_121921_010 Hb_171276_010--Hb_121921_010 Hb_006120_090 Hb_006120_090 Hb_000174_010--Hb_006120_090 Hb_001979_030 Hb_001979_030 Hb_000174_010--Hb_001979_030 Hb_078804_010 Hb_078804_010 Hb_000174_010--Hb_078804_010 Hb_001864_090 Hb_001864_090 Hb_000174_010--Hb_001864_090 Hb_056559_010 Hb_056559_010 Hb_000174_010--Hb_056559_010 Hb_000445_170 Hb_000445_170 Hb_000174_010--Hb_000445_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0087062 0.0120373 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0273462 0 0 0.0085753 0

CAGE analysis