Hb_000215_170

Information

Type -
Description -
Location Contig215: 147154-153168
Sequence    

Annotation

kegg
ID sot:102596491
description uncharacterized LOC102596491
nr
ID XP_006340515.1
description PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
swissprot
ID -
description -
trembl
ID A0A067KID3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14824 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000215_170 0.0 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
2 Hb_003368_130 0.2040069873 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_003918_040 0.2756862235 - - -
4 Hb_005183_160 0.2758049906 - - -
5 Hb_004304_050 0.27597036 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
6 Hb_008880_010 0.3072690838 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
7 Hb_061390_010 0.3073237944 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
8 Hb_115350_010 0.3079779185 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
9 Hb_002779_020 0.3081702745 - - transcription factor, putative [Ricinus communis]
10 Hb_136696_010 0.3085288593 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
11 Hb_000389_070 0.3133967723 - - -
12 Hb_068804_160 0.3141656004 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
13 Hb_002307_130 0.320919636 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000350_110 0.3513874148 - - PREDICTED: uncharacterized protein LOC104220461 isoform X2 [Nicotiana sylvestris]
15 Hb_057655_010 0.3799949312 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
16 Hb_010504_010 0.4073571041 - - 40S ribosomal protein S15C [Hevea brasiliensis]
17 Hb_000317_300 0.4075192543 - - -
18 Hb_001798_050 0.415863613 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
19 Hb_001824_060 0.4170454492 - - -
20 Hb_000011_170 0.4260038692 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]

Gene co-expression network

sample Hb_000215_170 Hb_000215_170 Hb_003368_130 Hb_003368_130 Hb_000215_170--Hb_003368_130 Hb_003918_040 Hb_003918_040 Hb_000215_170--Hb_003918_040 Hb_005183_160 Hb_005183_160 Hb_000215_170--Hb_005183_160 Hb_004304_050 Hb_004304_050 Hb_000215_170--Hb_004304_050 Hb_008880_010 Hb_008880_010 Hb_000215_170--Hb_008880_010 Hb_061390_010 Hb_061390_010 Hb_000215_170--Hb_061390_010 Hb_000389_070 Hb_000389_070 Hb_003368_130--Hb_000389_070 Hb_000317_300 Hb_000317_300 Hb_003368_130--Hb_000317_300 Hb_019093_010 Hb_019093_010 Hb_003368_130--Hb_019093_010 Hb_000069_680 Hb_000069_680 Hb_003368_130--Hb_000069_680 Hb_006775_010 Hb_006775_010 Hb_003368_130--Hb_006775_010 Hb_003918_040--Hb_005183_160 Hb_003918_040--Hb_004304_050 Hb_003918_040--Hb_008880_010 Hb_003918_040--Hb_061390_010 Hb_115350_010 Hb_115350_010 Hb_003918_040--Hb_115350_010 Hb_002779_020 Hb_002779_020 Hb_003918_040--Hb_002779_020 Hb_005183_160--Hb_004304_050 Hb_005183_160--Hb_008880_010 Hb_005183_160--Hb_061390_010 Hb_005183_160--Hb_115350_010 Hb_005183_160--Hb_002779_020 Hb_004304_050--Hb_008880_010 Hb_004304_050--Hb_061390_010 Hb_004304_050--Hb_115350_010 Hb_004304_050--Hb_002779_020 Hb_008880_010--Hb_061390_010 Hb_008880_010--Hb_115350_010 Hb_008880_010--Hb_002779_020 Hb_136696_010 Hb_136696_010 Hb_008880_010--Hb_136696_010 Hb_068804_160 Hb_068804_160 Hb_008880_010--Hb_068804_160 Hb_061390_010--Hb_115350_010 Hb_061390_010--Hb_002779_020 Hb_061390_010--Hb_136696_010 Hb_061390_010--Hb_068804_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0393512 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0448649 0 0 0.0141598 0

CAGE analysis