Hb_003918_040

Information

Type -
Description -
Location Contig3918: 35675-36829
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003918_040 0.0 - - -
2 Hb_005183_160 0.0063864192 - - -
3 Hb_004304_050 0.0108823621 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
4 Hb_008880_010 0.1388032559 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
5 Hb_061390_010 0.1389318559 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
6 Hb_115350_010 0.1404621331 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
7 Hb_002779_020 0.1409096196 - - transcription factor, putative [Ricinus communis]
8 Hb_136696_010 0.1417408181 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_068804_160 0.1543405779 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
10 Hb_000215_170 0.2756862235 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
11 Hb_010504_010 0.3170037633 - - 40S ribosomal protein S15C [Hevea brasiliensis]
12 Hb_001798_050 0.3203898513 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
13 Hb_001824_060 0.3286935986 - - -
14 Hb_000011_170 0.3414525847 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
15 Hb_002307_130 0.3694560191 - - conserved hypothetical protein [Ricinus communis]
16 Hb_153231_040 0.376660573 - - -
17 Hb_004147_040 0.3823423064 - - hypothetical protein JCGZ_15918 [Jatropha curcas]
18 Hb_002239_010 0.3998332831 - - -
19 Hb_004631_120 0.4029284728 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001787_040 0.412511417 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_003918_040 Hb_003918_040 Hb_005183_160 Hb_005183_160 Hb_003918_040--Hb_005183_160 Hb_004304_050 Hb_004304_050 Hb_003918_040--Hb_004304_050 Hb_008880_010 Hb_008880_010 Hb_003918_040--Hb_008880_010 Hb_061390_010 Hb_061390_010 Hb_003918_040--Hb_061390_010 Hb_115350_010 Hb_115350_010 Hb_003918_040--Hb_115350_010 Hb_002779_020 Hb_002779_020 Hb_003918_040--Hb_002779_020 Hb_005183_160--Hb_004304_050 Hb_005183_160--Hb_008880_010 Hb_005183_160--Hb_061390_010 Hb_005183_160--Hb_115350_010 Hb_005183_160--Hb_002779_020 Hb_004304_050--Hb_008880_010 Hb_004304_050--Hb_061390_010 Hb_004304_050--Hb_115350_010 Hb_004304_050--Hb_002779_020 Hb_008880_010--Hb_061390_010 Hb_008880_010--Hb_115350_010 Hb_008880_010--Hb_002779_020 Hb_136696_010 Hb_136696_010 Hb_008880_010--Hb_136696_010 Hb_068804_160 Hb_068804_160 Hb_008880_010--Hb_068804_160 Hb_061390_010--Hb_115350_010 Hb_061390_010--Hb_002779_020 Hb_061390_010--Hb_136696_010 Hb_061390_010--Hb_068804_160 Hb_115350_010--Hb_002779_020 Hb_115350_010--Hb_136696_010 Hb_115350_010--Hb_068804_160 Hb_002779_020--Hb_136696_010 Hb_002779_020--Hb_068804_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0852569 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0982943 0 0 0 0

CAGE analysis