Hb_171276_010

Information

Type -
Description -
Location Contig171276: 304-893
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_171276_010 0.0 - - -
2 Hb_002855_020 0.131575842 - - -
3 Hb_087388_010 0.3110219382 transcription factor TF Family: bHLH PREDICTED: transcription factor DYT1 [Jatropha curcas]
4 Hb_000170_180 0.3303114444 - - PREDICTED: uncharacterized protein LOC105109433 [Populus euphratica]
5 Hb_008453_040 0.3360394691 - - PREDICTED: expansin-A11 [Jatropha curcas]
6 Hb_004208_020 0.3677648226 - - phosphoglycerate kinase, putative [Ricinus communis]
7 Hb_121921_010 0.3770119068 - - -
8 Hb_005181_200 0.3817050904 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
9 Hb_004032_340 0.3822243304 - - PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]
10 Hb_003938_210 0.3832876175 - - triacylglycerol lipase, putative [Ricinus communis]
11 Hb_000089_200 0.3884500564 - - hypothetical protein VITISV_019292 [Vitis vinifera]
12 Hb_001195_300 0.3885083405 - - PREDICTED: DUF21 domain-containing protein At1g47330 isoform X1 [Jatropha curcas]
13 Hb_002805_100 0.3896852585 - - Receptor-like protein 12 [Morus notabilis]
14 Hb_001638_180 0.3907327653 - - PREDICTED: D-arabinono-1,4-lactone oxidase-like [Jatropha curcas]
15 Hb_000347_520 0.3914884492 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
16 Hb_002675_210 0.3936077709 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020-like [Citrus sinensis]
17 Hb_000174_010 0.3938255488 - - PREDICTED: uncharacterized protein LOC103444904 [Malus domestica]
18 Hb_001437_090 0.3945576631 - - PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit [Jatropha curcas]
19 Hb_000027_280 0.3949589598 - - PREDICTED: uncharacterized protein LOC105642051 [Jatropha curcas]
20 Hb_000671_180 0.3962466696 - - RING zinc finger protein, putative [Arabidopsis thaliana]

Gene co-expression network

sample Hb_171276_010 Hb_171276_010 Hb_002855_020 Hb_002855_020 Hb_171276_010--Hb_002855_020 Hb_087388_010 Hb_087388_010 Hb_171276_010--Hb_087388_010 Hb_000170_180 Hb_000170_180 Hb_171276_010--Hb_000170_180 Hb_008453_040 Hb_008453_040 Hb_171276_010--Hb_008453_040 Hb_004208_020 Hb_004208_020 Hb_171276_010--Hb_004208_020 Hb_121921_010 Hb_121921_010 Hb_171276_010--Hb_121921_010 Hb_002855_020--Hb_087388_010 Hb_002855_020--Hb_000170_180 Hb_002855_020--Hb_008453_040 Hb_000347_520 Hb_000347_520 Hb_002855_020--Hb_000347_520 Hb_010866_020 Hb_010866_020 Hb_002855_020--Hb_010866_020 Hb_087388_010--Hb_008453_040 Hb_087388_010--Hb_000347_520 Hb_087388_010--Hb_010866_020 Hb_005870_010 Hb_005870_010 Hb_087388_010--Hb_005870_010 Hb_087388_010--Hb_000170_180 Hb_004032_340 Hb_004032_340 Hb_087388_010--Hb_004032_340 Hb_000614_310 Hb_000614_310 Hb_000170_180--Hb_000614_310 Hb_000170_180--Hb_000347_520 Hb_000367_110 Hb_000367_110 Hb_000170_180--Hb_000367_110 Hb_001195_670 Hb_001195_670 Hb_000170_180--Hb_001195_670 Hb_004308_010 Hb_004308_010 Hb_000170_180--Hb_004308_010 Hb_008453_040--Hb_000347_520 Hb_002986_040 Hb_002986_040 Hb_008453_040--Hb_002986_040 Hb_008453_040--Hb_010866_020 Hb_180924_010 Hb_180924_010 Hb_008453_040--Hb_180924_010 Hb_008453_040--Hb_004032_340 Hb_004330_050 Hb_004330_050 Hb_004208_020--Hb_004330_050 Hb_001300_060 Hb_001300_060 Hb_004208_020--Hb_001300_060 Hb_010308_010 Hb_010308_010 Hb_004208_020--Hb_010308_010 Hb_000496_080 Hb_000496_080 Hb_004208_020--Hb_000496_080 Hb_020112_010 Hb_020112_010 Hb_004208_020--Hb_020112_010 Hb_006275_040 Hb_006275_040 Hb_004208_020--Hb_006275_040 Hb_121921_010--Hb_004208_020 Hb_002437_010 Hb_002437_010 Hb_121921_010--Hb_002437_010 Hb_000147_010 Hb_000147_010 Hb_121921_010--Hb_000147_010 Hb_011344_100 Hb_011344_100 Hb_121921_010--Hb_011344_100 Hb_005181_200 Hb_005181_200 Hb_121921_010--Hb_005181_200 Hb_000544_130 Hb_000544_130 Hb_121921_010--Hb_000544_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.248327 0.837619 0.306106 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.356251 0 0 0.259565 0

CAGE analysis