Hb_000268_060

Information

Type -
Description -
Location Contig268: 58629-61400
Sequence    

Annotation

kegg
ID rcu:RCOM_0656320
description receptor protein kinase, putative (EC:2.7.11.30)
nr
ID XP_002533445.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q9LX29
description Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1
trembl
ID B9T5C6
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_0656320 PE=3 SV=1
Gene Ontology
ID GO:0009986
description serine threonine-protein kinase-like protein acr4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27904: 60840-61051
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000268_060 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_000080_070 0.0995880858 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
3 Hb_003750_110 0.1044431853 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
4 Hb_028227_060 0.1128059692 - - PREDICTED: non-specific lipid transfer protein GPI-anchored 1-like [Populus euphratica]
5 Hb_000836_620 0.1178836021 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
6 Hb_005460_040 0.1190105987 - - PREDICTED: long chain acyl-CoA synthetase 2 [Jatropha curcas]
7 Hb_011930_190 0.1204054456 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
8 Hb_000142_050 0.1215432364 - - PREDICTED: beta-glucosidase 18-like isoform X1 [Populus euphratica]
9 Hb_001205_140 0.1227247557 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
10 Hb_002284_290 0.1231424588 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
11 Hb_004553_050 0.1241767039 - - PREDICTED: probable inactive receptor kinase At5g10020 [Jatropha curcas]
12 Hb_004464_040 0.1241924506 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
13 Hb_001374_050 0.1246435232 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
14 Hb_147976_010 0.1257655294 - - -
15 Hb_002042_090 0.1264317575 - - PREDICTED: root phototropism protein 3-like [Jatropha curcas]
16 Hb_002276_220 0.1272429016 - - PREDICTED: uncharacterized protein LOC105640684 isoform X2 [Jatropha curcas]
17 Hb_031862_210 0.1274650346 - - hypothetical protein JCGZ_24955 [Jatropha curcas]
18 Hb_145502_010 0.1279809408 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
19 Hb_003598_070 0.1279949811 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000974_040 0.1282569927 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Jatropha curcas]

Gene co-expression network

sample Hb_000268_060 Hb_000268_060 Hb_000080_070 Hb_000080_070 Hb_000268_060--Hb_000080_070 Hb_003750_110 Hb_003750_110 Hb_000268_060--Hb_003750_110 Hb_028227_060 Hb_028227_060 Hb_000268_060--Hb_028227_060 Hb_000836_620 Hb_000836_620 Hb_000268_060--Hb_000836_620 Hb_005460_040 Hb_005460_040 Hb_000268_060--Hb_005460_040 Hb_011930_190 Hb_011930_190 Hb_000268_060--Hb_011930_190 Hb_000080_070--Hb_003750_110 Hb_001287_020 Hb_001287_020 Hb_000080_070--Hb_001287_020 Hb_000080_070--Hb_000836_620 Hb_001638_060 Hb_001638_060 Hb_000080_070--Hb_001638_060 Hb_000142_050 Hb_000142_050 Hb_000080_070--Hb_000142_050 Hb_003683_170 Hb_003683_170 Hb_000080_070--Hb_003683_170 Hb_003750_110--Hb_000836_620 Hb_003750_110--Hb_005460_040 Hb_001374_050 Hb_001374_050 Hb_003750_110--Hb_001374_050 Hb_003750_110--Hb_000142_050 Hb_002042_090 Hb_002042_090 Hb_003750_110--Hb_002042_090 Hb_000974_040 Hb_000974_040 Hb_028227_060--Hb_000974_040 Hb_002007_120 Hb_002007_120 Hb_028227_060--Hb_002007_120 Hb_000648_070 Hb_000648_070 Hb_028227_060--Hb_000648_070 Hb_004884_100 Hb_004884_100 Hb_028227_060--Hb_004884_100 Hb_137216_010 Hb_137216_010 Hb_028227_060--Hb_137216_010 Hb_002929_030 Hb_002929_030 Hb_000836_620--Hb_002929_030 Hb_001433_210 Hb_001433_210 Hb_000836_620--Hb_001433_210 Hb_000635_240 Hb_000635_240 Hb_000836_620--Hb_000635_240 Hb_000210_210 Hb_000210_210 Hb_000836_620--Hb_000210_210 Hb_000836_620--Hb_000142_050 Hb_004553_050 Hb_004553_050 Hb_005460_040--Hb_004553_050 Hb_005460_040--Hb_001374_050 Hb_005460_040--Hb_002042_090 Hb_001300_190 Hb_001300_190 Hb_005460_040--Hb_001300_190 Hb_001789_220 Hb_001789_220 Hb_005460_040--Hb_001789_220 Hb_001166_010 Hb_001166_010 Hb_005460_040--Hb_001166_010 Hb_031377_010 Hb_031377_010 Hb_011930_190--Hb_031377_010 Hb_002044_100 Hb_002044_100 Hb_011930_190--Hb_002044_100 Hb_000144_130 Hb_000144_130 Hb_011930_190--Hb_000144_130 Hb_000172_660 Hb_000172_660 Hb_011930_190--Hb_000172_660 Hb_003050_140 Hb_003050_140 Hb_011930_190--Hb_003050_140 Hb_000510_250 Hb_000510_250 Hb_011930_190--Hb_000510_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.048418 0 3.40157 0.98913 0.0139456 0.0576411
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.031604 0.0248695 0 0.0444094 2.49006

CAGE analysis