Hb_001789_220

Information

Type -
Description -
Location Contig1789: 209322-211366
Sequence    

Annotation

kegg
ID rcu:RCOM_1583010
description Anthranilate N-benzoyltransferase protein, putative (EC:2.3.1.144)
nr
ID XP_012090211.1
description PREDICTED: BAHD acyltransferase DCR-like [Jatropha curcas]
swissprot
ID Q9FF86
description BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1
trembl
ID A0A067JEG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26077 PE=4 SV=1
Gene Ontology
ID GO:0047672
description bahd acyltransferase dcr-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17235: 209373-211358
cDNA
(Sanger)
(ID:Location)		 015_N07.ab1: 210493-211320 , 043_M15.ab1: 210411-211320 , 046_A14.ab1: 209786-210520 , 051_A15.ab1: 210287-211320

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001789_220 0.0 - - PREDICTED: BAHD acyltransferase DCR-like [Jatropha curcas]
2 Hb_001205_140 0.033380543 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
3 Hb_041433_010 0.0472083821 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
4 Hb_006117_030 0.0483588963 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002042_090 0.0509743588 - - PREDICTED: root phototropism protein 3-like [Jatropha curcas]
6 Hb_005345_020 0.0536009977 - - Root phototropism protein, putative [Ricinus communis]
7 Hb_007681_010 0.0551094078 - - hypothetical protein RCOM_2128750 [Ricinus communis]
8 Hb_145502_010 0.0553432659 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
9 Hb_001206_110 0.0567686067 - - PREDICTED: GDSL esterase/lipase At5g45910 [Jatropha curcas]
10 Hb_013394_070 0.0575500167 - - hypothetical protein POPTR_0013s12090g [Populus trichocarpa]
11 Hb_001253_050 0.0579233464 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
12 Hb_009476_030 0.0583977427 - - fatty acid desaturase [Manihot esculenta]
13 Hb_002973_100 0.0597448334 transcription factor TF Family: GNAT PREDICTED: probable N-acetyltransferase HLS1 [Populus euphratica]
14 Hb_000018_110 0.0598475405 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]
15 Hb_008173_160 0.062101848 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
16 Hb_088689_010 0.0621664488 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
17 Hb_007853_030 0.0624895803 - - structural molecule, putative [Ricinus communis]
18 Hb_007894_200 0.0632700162 - - ubiquitin-conjugating enzyme variant, putative [Ricinus communis]
19 Hb_000160_020 0.0648325917 - - PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Jatropha curcas]
20 Hb_000777_080 0.0658588564 - - hypothetical protein POPTR_0015s15410g [Populus trichocarpa]

Gene co-expression network

sample Hb_001789_220 Hb_001789_220 Hb_001205_140 Hb_001205_140 Hb_001789_220--Hb_001205_140 Hb_041433_010 Hb_041433_010 Hb_001789_220--Hb_041433_010 Hb_006117_030 Hb_006117_030 Hb_001789_220--Hb_006117_030 Hb_002042_090 Hb_002042_090 Hb_001789_220--Hb_002042_090 Hb_005345_020 Hb_005345_020 Hb_001789_220--Hb_005345_020 Hb_007681_010 Hb_007681_010 Hb_001789_220--Hb_007681_010 Hb_001205_140--Hb_006117_030 Hb_145502_010 Hb_145502_010 Hb_001205_140--Hb_145502_010 Hb_000018_110 Hb_000018_110 Hb_001205_140--Hb_000018_110 Hb_003598_070 Hb_003598_070 Hb_001205_140--Hb_003598_070 Hb_147976_010 Hb_147976_010 Hb_001205_140--Hb_147976_010 Hb_041433_010--Hb_005345_020 Hb_001571_100 Hb_001571_100 Hb_041433_010--Hb_001571_100 Hb_009476_030 Hb_009476_030 Hb_041433_010--Hb_009476_030 Hb_000608_270 Hb_000608_270 Hb_041433_010--Hb_000608_270 Hb_041433_010--Hb_007681_010 Hb_014056_020 Hb_014056_020 Hb_006117_030--Hb_014056_020 Hb_002965_170 Hb_002965_170 Hb_006117_030--Hb_002965_170 Hb_000557_070 Hb_000557_070 Hb_006117_030--Hb_000557_070 Hb_000915_210 Hb_000915_210 Hb_006117_030--Hb_000915_210 Hb_004724_090 Hb_004724_090 Hb_006117_030--Hb_004724_090 Hb_002042_090--Hb_009476_030 Hb_002042_090--Hb_001205_140 Hb_007853_030 Hb_007853_030 Hb_002042_090--Hb_007853_030 Hb_002042_090--Hb_005345_020 Hb_000210_030 Hb_000210_030 Hb_002042_090--Hb_000210_030 Hb_005345_020--Hb_009476_030 Hb_001675_090 Hb_001675_090 Hb_005345_020--Hb_001675_090 Hb_005345_020--Hb_001571_100 Hb_001975_120 Hb_001975_120 Hb_005345_020--Hb_001975_120 Hb_007681_010--Hb_007853_030 Hb_001166_010 Hb_001166_010 Hb_007681_010--Hb_001166_010 Hb_002044_100 Hb_002044_100 Hb_007681_010--Hb_002044_100 Hb_000144_130 Hb_000144_130 Hb_007681_010--Hb_000144_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0113077 5.84699 613.532 229.26 0 0.0993323
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0257212 0 0 1.61219 461.175

CAGE analysis