Hb_000256_030

Information

Type -
Description -
Location Contig256: 76918-80473
Sequence    

Annotation

kegg
ID rcu:RCOM_0922010
description transferase, putative (EC:2.3.1.144)
nr
ID XP_002515446.1
description transferase, putative [Ricinus communis]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID B9RNX7
description Transferase, putative OS=Ricinus communis GN=RCOM_0922010 PE=4 SV=1
Gene Ontology
ID GO:0016747
description omega-hydroxypalmitate o-feruloyl transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26675: 77832-79997
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_030 0.0 - - transferase, putative [Ricinus communis]
2 Hb_001633_160 0.1475828117 - - PREDICTED: zerumbone synthase-like isoform X2 [Jatropha curcas]
3 Hb_000331_300 0.1537470399 - - PREDICTED: malate synthase, glyoxysomal [Jatropha curcas]
4 Hb_007846_030 0.161886594 - - Uncharacterized protein TCM_021839 [Theobroma cacao]
5 Hb_003376_110 0.1631901227 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000160_190 0.1654826681 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
7 Hb_003248_030 0.1655790898 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
8 Hb_000213_020 0.1685546138 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005977_080 0.1711160458 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5-like [Jatropha curcas]
10 Hb_005694_170 0.1734662264 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
11 Hb_003502_040 0.175514597 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
12 Hb_023640_020 0.1755223261 - - conserved hypothetical protein [Ricinus communis]
13 Hb_097292_010 0.176342721 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
14 Hb_011310_170 0.1770561699 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
15 Hb_024714_090 0.1797046716 rubber biosynthesis Gene Name: SRPP3 PREDICTED: stress-related protein [Jatropha curcas]
16 Hb_001085_160 0.1834876562 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
17 Hb_004137_110 0.1835994381 - - PREDICTED: probable auxin efflux carrier component 6 [Jatropha curcas]
18 Hb_007426_190 0.1858525241 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
19 Hb_029262_010 0.1864393215 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
20 Hb_024714_110 0.1876903164 - - PREDICTED: translocator protein homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000256_030 Hb_000256_030 Hb_001633_160 Hb_001633_160 Hb_000256_030--Hb_001633_160 Hb_000331_300 Hb_000331_300 Hb_000256_030--Hb_000331_300 Hb_007846_030 Hb_007846_030 Hb_000256_030--Hb_007846_030 Hb_003376_110 Hb_003376_110 Hb_000256_030--Hb_003376_110 Hb_000160_190 Hb_000160_190 Hb_000256_030--Hb_000160_190 Hb_003248_030 Hb_003248_030 Hb_000256_030--Hb_003248_030 Hb_024714_090 Hb_024714_090 Hb_001633_160--Hb_024714_090 Hb_001307_020 Hb_001307_020 Hb_001633_160--Hb_001307_020 Hb_001085_160 Hb_001085_160 Hb_001633_160--Hb_001085_160 Hb_000027_160 Hb_000027_160 Hb_001633_160--Hb_000027_160 Hb_000175_300 Hb_000175_300 Hb_001633_160--Hb_000175_300 Hb_000283_090 Hb_000283_090 Hb_000331_300--Hb_000283_090 Hb_000069_510 Hb_000069_510 Hb_000331_300--Hb_000069_510 Hb_001301_310 Hb_001301_310 Hb_000331_300--Hb_001301_310 Hb_001288_040 Hb_001288_040 Hb_000331_300--Hb_001288_040 Hb_000331_300--Hb_003376_110 Hb_000331_300--Hb_000160_190 Hb_097292_010 Hb_097292_010 Hb_007846_030--Hb_097292_010 Hb_007426_190 Hb_007426_190 Hb_007846_030--Hb_007426_190 Hb_005694_170 Hb_005694_170 Hb_007846_030--Hb_005694_170 Hb_005731_040 Hb_005731_040 Hb_007846_030--Hb_005731_040 Hb_007846_030--Hb_003376_110 Hb_000878_080 Hb_000878_080 Hb_007846_030--Hb_000878_080 Hb_003376_110--Hb_005694_170 Hb_003207_210 Hb_003207_210 Hb_003376_110--Hb_003207_210 Hb_164337_010 Hb_164337_010 Hb_003376_110--Hb_164337_010 Hb_003376_110--Hb_000160_190 Hb_000056_290 Hb_000056_290 Hb_003376_110--Hb_000056_290 Hb_023640_020 Hb_023640_020 Hb_000160_190--Hb_023640_020 Hb_049846_010 Hb_049846_010 Hb_000160_190--Hb_049846_010 Hb_005977_080 Hb_005977_080 Hb_000160_190--Hb_005977_080 Hb_029262_010 Hb_029262_010 Hb_000160_190--Hb_029262_010 Hb_004137_110 Hb_004137_110 Hb_000160_190--Hb_004137_110 Hb_004128_150 Hb_004128_150 Hb_000160_190--Hb_004128_150 Hb_003502_040 Hb_003502_040 Hb_003248_030--Hb_003502_040 Hb_004316_020 Hb_004316_020 Hb_003248_030--Hb_004316_020 Hb_018563_010 Hb_018563_010 Hb_003248_030--Hb_018563_010 Hb_003248_030--Hb_029262_010 Hb_003248_030--Hb_005694_170 Hb_000809_130 Hb_000809_130 Hb_003248_030--Hb_000809_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0909639 0.566746 0.451705 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.053176 0 0 0.110915

CAGE analysis