Hb_000094_080

Information

Type -
Description -
Location Contig94: 53467-54610
Sequence    

Annotation

kegg
ID pop:POPTR_0002s26190g
description POPTRDRAFT_830621; hypothetical protein
nr
ID XP_012071849.1
description PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KU37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04428 PE=4 SV=1
Gene Ontology
ID GO:0008168
description s-adenosyl-l-methionine-dependent methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_080 0.0 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
2 Hb_002943_010 0.164219162 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
3 Hb_002817_060 0.1734958308 - - PREDICTED: coatomer subunit alpha-1 [Jatropha curcas]
4 Hb_000809_020 0.1795615046 desease resistance Gene Name: RPW8 leucine-rich repeat-containing protein, putative [Ricinus communis]
5 Hb_001393_010 0.1808943808 - - hypothetical protein POPTR_0018s06150g [Populus trichocarpa]
6 Hb_004917_010 0.1817321309 - - PREDICTED: U-box domain-containing protein 13-like [Jatropha curcas]
7 Hb_007897_030 0.1831834967 - - PREDICTED: serine/threonine-protein kinase-like protein CCR2 [Jatropha curcas]
8 Hb_005489_070 0.1886280735 - - PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
9 Hb_002603_040 0.1899518534 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
10 Hb_000160_330 0.1904225749 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
11 Hb_099084_010 0.1905703231 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_008226_030 0.1911352311 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
13 Hb_001511_180 0.1918272124 - - Clathrin heavy chain 2 -like protein [Gossypium arboreum]
14 Hb_001178_030 0.1919858855 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Jatropha curcas]
15 Hb_023344_160 0.192346683 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
16 Hb_000404_040 0.1927612726 - - conserved hypothetical protein [Ricinus communis]
17 Hb_031091_030 0.1929696695 - - hypothetical protein OsI_25921 [Oryza sativa Indica Group]
18 Hb_002686_140 0.1933830991 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]
19 Hb_000367_020 0.1941242704 - - PREDICTED: uncharacterized protein LOC105640608 [Jatropha curcas]
20 Hb_009476_120 0.1942163446 - - Clathrin heavy chain 1 [Glycine soja]

Gene co-expression network

sample Hb_000094_080 Hb_000094_080 Hb_002943_010 Hb_002943_010 Hb_000094_080--Hb_002943_010 Hb_002817_060 Hb_002817_060 Hb_000094_080--Hb_002817_060 Hb_000809_020 Hb_000809_020 Hb_000094_080--Hb_000809_020 Hb_001393_010 Hb_001393_010 Hb_000094_080--Hb_001393_010 Hb_004917_010 Hb_004917_010 Hb_000094_080--Hb_004917_010 Hb_007897_030 Hb_007897_030 Hb_000094_080--Hb_007897_030 Hb_000340_220 Hb_000340_220 Hb_002943_010--Hb_000340_220 Hb_000066_040 Hb_000066_040 Hb_002943_010--Hb_000066_040 Hb_002603_010 Hb_002603_010 Hb_002943_010--Hb_002603_010 Hb_013399_090 Hb_013399_090 Hb_002943_010--Hb_013399_090 Hb_000404_040 Hb_000404_040 Hb_002943_010--Hb_000404_040 Hb_002928_020 Hb_002928_020 Hb_002943_010--Hb_002928_020 Hb_000347_300 Hb_000347_300 Hb_002817_060--Hb_000347_300 Hb_001828_170 Hb_001828_170 Hb_002817_060--Hb_001828_170 Hb_001511_180 Hb_001511_180 Hb_002817_060--Hb_001511_180 Hb_001329_250 Hb_001329_250 Hb_002817_060--Hb_001329_250 Hb_006839_010 Hb_006839_010 Hb_002817_060--Hb_006839_010 Hb_000123_180 Hb_000123_180 Hb_002817_060--Hb_000123_180 Hb_007527_010 Hb_007527_010 Hb_000809_020--Hb_007527_010 Hb_011618_070 Hb_011618_070 Hb_000809_020--Hb_011618_070 Hb_000243_260 Hb_000243_260 Hb_000809_020--Hb_000243_260 Hb_111552_010 Hb_111552_010 Hb_000809_020--Hb_111552_010 Hb_012539_060 Hb_012539_060 Hb_000809_020--Hb_012539_060 Hb_012632_010 Hb_012632_010 Hb_000809_020--Hb_012632_010 Hb_001178_030 Hb_001178_030 Hb_001393_010--Hb_001178_030 Hb_001279_040 Hb_001279_040 Hb_001393_010--Hb_001279_040 Hb_008226_030 Hb_008226_030 Hb_001393_010--Hb_008226_030 Hb_000806_030 Hb_000806_030 Hb_001393_010--Hb_000806_030 Hb_034585_010 Hb_034585_010 Hb_001393_010--Hb_034585_010 Hb_000367_020 Hb_000367_020 Hb_001393_010--Hb_000367_020 Hb_003517_070 Hb_003517_070 Hb_004917_010--Hb_003517_070 Hb_000484_010 Hb_000484_010 Hb_004917_010--Hb_000484_010 Hb_003340_010 Hb_003340_010 Hb_004917_010--Hb_003340_010 Hb_002025_030 Hb_002025_030 Hb_004917_010--Hb_002025_030 Hb_023344_160 Hb_023344_160 Hb_004917_010--Hb_023344_160 Hb_000392_160 Hb_000392_160 Hb_004917_010--Hb_000392_160 Hb_031089_050 Hb_031089_050 Hb_007897_030--Hb_031089_050 Hb_002311_130 Hb_002311_130 Hb_007897_030--Hb_002311_130 Hb_002400_060 Hb_002400_060 Hb_007897_030--Hb_002400_060 Hb_005192_010 Hb_005192_010 Hb_007897_030--Hb_005192_010 Hb_001998_150 Hb_001998_150 Hb_007897_030--Hb_001998_150 Hb_002805_090 Hb_002805_090 Hb_007897_030--Hb_002805_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.190145 0.906585 0.569423 0.77358 0.312873 0.247862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.147239 0.892442 0.515493 1.0899

CAGE analysis