Hb_000069_570

Information

Type -
Description -
Location Contig69: 604767-610285
Sequence    

Annotation

kegg
ID rcu:RCOM_0237030
description hypothetical protein
nr
ID XP_012083245.1
description PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FHK4
description Uncharacterized protein At5g05190 OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1
trembl
ID A0A067K9M0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14285 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54261: 604902-607517 , PASA_asmbl_54265: 609649-609939
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_570 0.0 - - PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Jatropha curcas]
2 Hb_008014_040 0.0804003621 - - PREDICTED: uncharacterized protein LOC105649721 [Jatropha curcas]
3 Hb_000022_190 0.0892606617 - - PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like [Jatropha curcas]
4 Hb_005048_140 0.0896205807 - - conserved hypothetical protein [Ricinus communis]
5 Hb_116420_040 0.091582816 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010315_020 0.0924046197 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
7 Hb_162275_040 0.0924087577 - - conserved hypothetical protein [Ricinus communis]
8 Hb_041327_020 0.0961070994 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000347_560 0.0962699287 - - -
10 Hb_001194_020 0.0986840458 - - microtubule associated protein xmap215, putative [Ricinus communis]
11 Hb_171334_010 0.099005478 - - PREDICTED: CDPK-related kinase 5 [Jatropha curcas]
12 Hb_005895_010 0.1007539178 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
13 Hb_006355_020 0.1008964361 - - PREDICTED: CLIP-associated protein [Jatropha curcas]
14 Hb_001109_060 0.1053772609 - - amino acid transporter, putative [Ricinus communis]
15 Hb_000664_110 0.1073746179 - - PREDICTED: monoglyceride lipase [Jatropha curcas]
16 Hb_004701_050 0.1085089749 - - alpha1 family protein [Populus trichocarpa]
17 Hb_000347_040 0.1092884067 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
18 Hb_000640_070 0.110898574 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
19 Hb_004531_100 0.1114571366 - - PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Jatropha curcas]
20 Hb_098209_010 0.1116734811 - - ATP synthase subunit beta vacuolar, putative [Ricinus communis]

Gene co-expression network

sample Hb_000069_570 Hb_000069_570 Hb_008014_040 Hb_008014_040 Hb_000069_570--Hb_008014_040 Hb_000022_190 Hb_000022_190 Hb_000069_570--Hb_000022_190 Hb_005048_140 Hb_005048_140 Hb_000069_570--Hb_005048_140 Hb_116420_040 Hb_116420_040 Hb_000069_570--Hb_116420_040 Hb_010315_020 Hb_010315_020 Hb_000069_570--Hb_010315_020 Hb_162275_040 Hb_162275_040 Hb_000069_570--Hb_162275_040 Hb_008014_040--Hb_010315_020 Hb_000212_420 Hb_000212_420 Hb_008014_040--Hb_000212_420 Hb_008511_020 Hb_008511_020 Hb_008014_040--Hb_008511_020 Hb_022250_010 Hb_022250_010 Hb_008014_040--Hb_022250_010 Hb_159809_030 Hb_159809_030 Hb_008014_040--Hb_159809_030 Hb_089246_010 Hb_089246_010 Hb_000022_190--Hb_089246_010 Hb_001018_090 Hb_001018_090 Hb_000022_190--Hb_001018_090 Hb_000022_190--Hb_008014_040 Hb_000103_340 Hb_000103_340 Hb_000022_190--Hb_000103_340 Hb_000635_090 Hb_000635_090 Hb_000022_190--Hb_000635_090 Hb_005048_140--Hb_116420_040 Hb_002471_180 Hb_002471_180 Hb_005048_140--Hb_002471_180 Hb_041327_020 Hb_041327_020 Hb_005048_140--Hb_041327_020 Hb_005048_140--Hb_000022_190 Hb_003376_260 Hb_003376_260 Hb_005048_140--Hb_003376_260 Hb_000608_260 Hb_000608_260 Hb_116420_040--Hb_000608_260 Hb_001349_030 Hb_001349_030 Hb_116420_040--Hb_001349_030 Hb_001194_020 Hb_001194_020 Hb_116420_040--Hb_001194_020 Hb_001059_130 Hb_001059_130 Hb_116420_040--Hb_001059_130 Hb_010315_020--Hb_000212_420 Hb_000066_150 Hb_000066_150 Hb_010315_020--Hb_000066_150 Hb_000588_080 Hb_000588_080 Hb_010315_020--Hb_000588_080 Hb_001776_020 Hb_001776_020 Hb_010315_020--Hb_001776_020 Hb_044486_020 Hb_044486_020 Hb_010315_020--Hb_044486_020 Hb_000086_440 Hb_000086_440 Hb_162275_040--Hb_000086_440 Hb_002539_110 Hb_002539_110 Hb_162275_040--Hb_002539_110 Hb_001109_060 Hb_001109_060 Hb_162275_040--Hb_001109_060 Hb_010272_010 Hb_010272_010 Hb_162275_040--Hb_010272_010 Hb_005227_010 Hb_005227_010 Hb_162275_040--Hb_005227_010 Hb_006355_020 Hb_006355_020 Hb_162275_040--Hb_006355_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.17958 7.87811 7.36948 9.88026 5.92974 9.90435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.8954 2.47466 2.95596 3.23761 10.3732

CAGE analysis