Hb_184520_010

Information

Type -
Description -
Location Contig184520: 145-744
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance gene nbs-lrr family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184520_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_001157_100 0.221158517 - - PREDICTED: uncharacterized protein LOC104887185 [Beta vulgaris subsp. vulgaris]
3 Hb_002666_020 0.2539657073 - - VAMP/SYNAPTOBREVIN-ASSOCIATED protein 27-1 [Populus trichocarpa]
4 Hb_003805_060 0.2582446005 - - protein binding protein, putative [Ricinus communis]
5 Hb_012788_010 0.2583790174 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
6 Hb_069033_010 0.2617823674 desease resistance Gene Name: DUF720 hypothetical protein CICLE_v10002052mg [Citrus clementina]
7 Hb_053125_010 0.2646781143 - - PREDICTED: uncharacterized protein LOC104881508 [Vitis vinifera]
8 Hb_001660_020 0.2695077485 desease resistance Gene Name: NB-ARC hypothetical protein Csa_5G648130 [Cucumis sativus]
9 Hb_134279_010 0.2733200966 - - PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
10 Hb_005137_030 0.281697464 - - conserved hypothetical protein [Ricinus communis]
11 Hb_167977_010 0.2923668618 - - hypothetical protein POPTR_0185s002102g, partial [Populus trichocarpa]
12 Hb_000631_110 0.2944925595 - - PREDICTED: activating signal cointegrator 1 complex subunit 3 [Jatropha curcas]
13 Hb_000589_130 0.2979886312 desease resistance Gene Name: NB-ARC unnamed protein product [Vitis vinifera]
14 Hb_000679_210 0.2985632032 - - grr1, plant, putative [Ricinus communis]
15 Hb_000940_150 0.2990499261 - - PREDICTED: uncharacterized protein LOC105643779 [Jatropha curcas]
16 Hb_102011_010 0.2993450597 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
17 Hb_000105_030 0.300038002 - - fkbp-rapamycin associated protein, putative [Ricinus communis]
18 Hb_007064_010 0.3006541712 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
19 Hb_141212_010 0.301588532 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
20 Hb_185830_070 0.3025076644 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_184520_010 Hb_184520_010 Hb_001157_100 Hb_001157_100 Hb_184520_010--Hb_001157_100 Hb_002666_020 Hb_002666_020 Hb_184520_010--Hb_002666_020 Hb_003805_060 Hb_003805_060 Hb_184520_010--Hb_003805_060 Hb_012788_010 Hb_012788_010 Hb_184520_010--Hb_012788_010 Hb_069033_010 Hb_069033_010 Hb_184520_010--Hb_069033_010 Hb_053125_010 Hb_053125_010 Hb_184520_010--Hb_053125_010 Hb_001157_100--Hb_069033_010 Hb_056012_020 Hb_056012_020 Hb_001157_100--Hb_056012_020 Hb_133385_010 Hb_133385_010 Hb_001157_100--Hb_133385_010 Hb_001660_020 Hb_001660_020 Hb_001157_100--Hb_001660_020 Hb_164096_010 Hb_164096_010 Hb_001157_100--Hb_164096_010 Hb_000733_210 Hb_000733_210 Hb_002666_020--Hb_000733_210 Hb_000853_400 Hb_000853_400 Hb_002666_020--Hb_000853_400 Hb_001636_020 Hb_001636_020 Hb_002666_020--Hb_001636_020 Hb_004724_120 Hb_004724_120 Hb_002666_020--Hb_004724_120 Hb_000544_050 Hb_000544_050 Hb_002666_020--Hb_000544_050 Hb_000193_140 Hb_000193_140 Hb_002666_020--Hb_000193_140 Hb_134279_010 Hb_134279_010 Hb_003805_060--Hb_134279_010 Hb_012338_030 Hb_012338_030 Hb_003805_060--Hb_012338_030 Hb_001912_080 Hb_001912_080 Hb_003805_060--Hb_001912_080 Hb_004244_010 Hb_004244_010 Hb_003805_060--Hb_004244_010 Hb_003805_070 Hb_003805_070 Hb_003805_060--Hb_003805_070 Hb_000940_170 Hb_000940_170 Hb_003805_060--Hb_000940_170 Hb_121992_010 Hb_121992_010 Hb_012788_010--Hb_121992_010 Hb_136880_010 Hb_136880_010 Hb_012788_010--Hb_136880_010 Hb_001304_130 Hb_001304_130 Hb_012788_010--Hb_001304_130 Hb_001485_010 Hb_001485_010 Hb_012788_010--Hb_001485_010 Hb_012788_010--Hb_134279_010 Hb_012788_010--Hb_053125_010 Hb_007064_010 Hb_007064_010 Hb_069033_010--Hb_007064_010 Hb_001829_020 Hb_001829_020 Hb_069033_010--Hb_001829_020 Hb_000566_180 Hb_000566_180 Hb_069033_010--Hb_000566_180 Hb_069033_010--Hb_056012_020 Hb_053125_010--Hb_001485_010 Hb_102011_010 Hb_102011_010 Hb_053125_010--Hb_102011_010 Hb_167977_010 Hb_167977_010 Hb_053125_010--Hb_167977_010 Hb_151706_010 Hb_151706_010 Hb_053125_010--Hb_151706_010 Hb_147218_010 Hb_147218_010 Hb_053125_010--Hb_147218_010 Hb_065500_010 Hb_065500_010 Hb_053125_010--Hb_065500_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.1383 0 0.376608 0.179778 1.14496
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.139242 0 0.737793 1.50384 0.610381

CAGE analysis