Hb_069033_010

Information

Type desease resistance
Description Gene Name: DUF720
Location Contig69033: 175-825
Sequence    

Annotation

kegg
ID cic:CICLE_v10002052mg
description hypothetical protein
nr
ID XP_006433166.1
description hypothetical protein CICLE_v10002052mg [Citrus clementina]
swissprot
ID Q8RXS5
description Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2
trembl
ID V4TA02
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002052mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_069033_010 0.0 desease resistance Gene Name: DUF720 hypothetical protein CICLE_v10002052mg [Citrus clementina]
2 Hb_184520_010 0.2617823674 - - Disease resistance protein RPS5, putative [Ricinus communis]
3 Hb_001157_100 0.2618894511 - - PREDICTED: uncharacterized protein LOC104887185 [Beta vulgaris subsp. vulgaris]
4 Hb_007064_010 0.2762954379 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
5 Hb_001829_020 0.2788301053 - - PREDICTED: uncharacterized protein LOC105637564 [Jatropha curcas]
6 Hb_000566_180 0.2789368839 transcription factor TF Family: M-type PREDICTED: MADS-box transcription factor 7-like [Jatropha curcas]
7 Hb_056012_020 0.2825230298 - - -
8 Hb_134279_010 0.2843458477 - - PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
9 Hb_133385_010 0.2898121914 - - -
10 Hb_001660_020 0.2931166057 desease resistance Gene Name: NB-ARC hypothetical protein Csa_5G648130 [Cucumis sativus]
11 Hb_003805_060 0.2981926169 - - protein binding protein, putative [Ricinus communis]
12 Hb_007234_010 0.2998491613 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
13 Hb_002823_010 0.3004800415 - - -
14 Hb_015183_080 0.3024298385 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
15 Hb_001916_070 0.3029587738 - - PREDICTED: phytochrome C [Jatropha curcas]
16 Hb_005754_030 0.3060289167 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
17 Hb_001050_020 0.3064975637 - - -
18 Hb_141212_010 0.3067613902 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
19 Hb_005489_070 0.3069540027 - - PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
20 Hb_012788_010 0.3098121553 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]

Gene co-expression network

sample Hb_069033_010 Hb_069033_010 Hb_184520_010 Hb_184520_010 Hb_069033_010--Hb_184520_010 Hb_001157_100 Hb_001157_100 Hb_069033_010--Hb_001157_100 Hb_007064_010 Hb_007064_010 Hb_069033_010--Hb_007064_010 Hb_001829_020 Hb_001829_020 Hb_069033_010--Hb_001829_020 Hb_000566_180 Hb_000566_180 Hb_069033_010--Hb_000566_180 Hb_056012_020 Hb_056012_020 Hb_069033_010--Hb_056012_020 Hb_184520_010--Hb_001157_100 Hb_002666_020 Hb_002666_020 Hb_184520_010--Hb_002666_020 Hb_003805_060 Hb_003805_060 Hb_184520_010--Hb_003805_060 Hb_012788_010 Hb_012788_010 Hb_184520_010--Hb_012788_010 Hb_053125_010 Hb_053125_010 Hb_184520_010--Hb_053125_010 Hb_001157_100--Hb_056012_020 Hb_133385_010 Hb_133385_010 Hb_001157_100--Hb_133385_010 Hb_001660_020 Hb_001660_020 Hb_001157_100--Hb_001660_020 Hb_164096_010 Hb_164096_010 Hb_001157_100--Hb_164096_010 Hb_000189_110 Hb_000189_110 Hb_007064_010--Hb_000189_110 Hb_000193_140 Hb_000193_140 Hb_007064_010--Hb_000193_140 Hb_002780_010 Hb_002780_010 Hb_007064_010--Hb_002780_010 Hb_140627_020 Hb_140627_020 Hb_007064_010--Hb_140627_020 Hb_002311_100 Hb_002311_100 Hb_007064_010--Hb_002311_100 Hb_002316_160 Hb_002316_160 Hb_007064_010--Hb_002316_160 Hb_004648_100 Hb_004648_100 Hb_001829_020--Hb_004648_100 Hb_005054_170 Hb_005054_170 Hb_001829_020--Hb_005054_170 Hb_169620_010 Hb_169620_010 Hb_001829_020--Hb_169620_010 Hb_003216_070 Hb_003216_070 Hb_001829_020--Hb_003216_070 Hb_002119_070 Hb_002119_070 Hb_001829_020--Hb_002119_070 Hb_005271_230 Hb_005271_230 Hb_000566_180--Hb_005271_230 Hb_057796_010 Hb_057796_010 Hb_000566_180--Hb_057796_010 Hb_001404_080 Hb_001404_080 Hb_000566_180--Hb_001404_080 Hb_006274_040 Hb_006274_040 Hb_000566_180--Hb_006274_040 Hb_012490_110 Hb_012490_110 Hb_000566_180--Hb_012490_110 Hb_050034_010 Hb_050034_010 Hb_000566_180--Hb_050034_010 Hb_056012_020--Hb_000566_180 Hb_000366_020 Hb_000366_020 Hb_056012_020--Hb_000366_020 Hb_008447_030 Hb_008447_030 Hb_056012_020--Hb_008447_030 Hb_034359_010 Hb_034359_010 Hb_056012_020--Hb_034359_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.695507 0.0305899 0.362981 0 0.698991
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0933365 0.0733622 0.517128 0.329942 0.572571

CAGE analysis