Hb_164096_010

Information

Type -
Description -
Location Contig164096: 517-933
Sequence    

Annotation

kegg
ID pmum:103330717
description uncharacterized LOC103330717
nr
ID XP_010106066.1
description hypothetical protein L484_021244 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RT82
description Uncharacterized protein OS=Morus notabilis GN=L484_021244 PE=4 SV=1
Gene Ontology
ID GO:0003899
description at5g42660 mjb21_3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164096_010 0.0 - - hypothetical protein L484_021244 [Morus notabilis]
2 Hb_142343_010 0.1500555042 - - ATP binding protein, putative [Ricinus communis]
3 Hb_163975_010 0.1728718874 - - PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X3 [Jatropha curcas]
4 Hb_008447_040 0.1847730508 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
5 Hb_038564_010 0.1886669026 - - PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Jatropha curcas]
6 Hb_012627_020 0.1909041147 - - PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
7 Hb_098315_080 0.192011753 - - methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis]
8 Hb_002748_030 0.1926292602 - - nucleotide binding protein, putative [Ricinus communis]
9 Hb_000586_030 0.1930029191 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
10 Hb_082793_010 0.1946916143 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_127552_060 0.1956793877 transcription factor TF Family: SWI/SNF-BAF60b protein binding protein, putative [Ricinus communis]
12 Hb_000066_170 0.1994458995 - - PREDICTED: phosphatidylinositol-3-phosphatase myotubularin-1 isoform X2 [Jatropha curcas]
13 Hb_004317_060 0.2036487027 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
14 Hb_002414_060 0.2048311376 - - hypothetical protein EUGRSUZ_E01310 [Eucalyptus grandis]
15 Hb_000429_150 0.2053354574 - - hypothetical protein JCGZ_06799 [Jatropha curcas]
16 Hb_152371_010 0.2064237473 - - RNA-binding KH domain-containing protein [Theobroma cacao]
17 Hb_003606_060 0.2074244592 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
18 Hb_000140_280 0.207860198 - - hypothetical protein B456_001G157900 [Gossypium raimondii]
19 Hb_138475_010 0.2094533762 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Populus euphratica]
20 Hb_000053_060 0.2102253582 - - hypothetical protein VITISV_022618 [Vitis vinifera]

Gene co-expression network

sample Hb_164096_010 Hb_164096_010 Hb_142343_010 Hb_142343_010 Hb_164096_010--Hb_142343_010 Hb_163975_010 Hb_163975_010 Hb_164096_010--Hb_163975_010 Hb_008447_040 Hb_008447_040 Hb_164096_010--Hb_008447_040 Hb_038564_010 Hb_038564_010 Hb_164096_010--Hb_038564_010 Hb_012627_020 Hb_012627_020 Hb_164096_010--Hb_012627_020 Hb_098315_080 Hb_098315_080 Hb_164096_010--Hb_098315_080 Hb_152371_010 Hb_152371_010 Hb_142343_010--Hb_152371_010 Hb_002311_340 Hb_002311_340 Hb_142343_010--Hb_002311_340 Hb_142343_010--Hb_163975_010 Hb_138475_010 Hb_138475_010 Hb_142343_010--Hb_138475_010 Hb_000228_110 Hb_000228_110 Hb_142343_010--Hb_000228_110 Hb_002748_030 Hb_002748_030 Hb_142343_010--Hb_002748_030 Hb_082793_010 Hb_082793_010 Hb_163975_010--Hb_082793_010 Hb_002748_020 Hb_002748_020 Hb_163975_010--Hb_002748_020 Hb_084670_010 Hb_084670_010 Hb_163975_010--Hb_084670_010 Hb_002908_060 Hb_002908_060 Hb_163975_010--Hb_002908_060 Hb_000053_060 Hb_000053_060 Hb_163975_010--Hb_000053_060 Hb_127552_060 Hb_127552_060 Hb_008447_040--Hb_127552_060 Hb_004448_090 Hb_004448_090 Hb_008447_040--Hb_004448_090 Hb_007023_030 Hb_007023_030 Hb_008447_040--Hb_007023_030 Hb_000429_150 Hb_000429_150 Hb_008447_040--Hb_000429_150 Hb_000236_310 Hb_000236_310 Hb_008447_040--Hb_000236_310 Hb_002414_060 Hb_002414_060 Hb_008447_040--Hb_002414_060 Hb_000586_030 Hb_000586_030 Hb_038564_010--Hb_000586_030 Hb_038564_010--Hb_142343_010 Hb_088327_010 Hb_088327_010 Hb_038564_010--Hb_088327_010 Hb_003697_050 Hb_003697_050 Hb_038564_010--Hb_003697_050 Hb_000019_180 Hb_000019_180 Hb_038564_010--Hb_000019_180 Hb_038564_010--Hb_138475_010 Hb_000656_090 Hb_000656_090 Hb_012627_020--Hb_000656_090 Hb_000160_160 Hb_000160_160 Hb_012627_020--Hb_000160_160 Hb_004333_050 Hb_004333_050 Hb_012627_020--Hb_004333_050 Hb_012627_020--Hb_127552_060 Hb_012627_020--Hb_008447_040 Hb_008447_030 Hb_008447_030 Hb_012627_020--Hb_008447_030 Hb_098315_080--Hb_007023_030 Hb_098315_080--Hb_000053_060 Hb_004411_060 Hb_004411_060 Hb_098315_080--Hb_004411_060 Hb_004449_080 Hb_004449_080 Hb_098315_080--Hb_004449_080 Hb_006909_010 Hb_006909_010 Hb_098315_080--Hb_006909_010 Hb_001452_210 Hb_001452_210 Hb_098315_080--Hb_001452_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.316 1.19018 2.98979 0.920443 5.20707
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.28935 1.54399 3.00946 4.95901 2.86746

CAGE analysis