Hb_000656_090

Information

Type -
Description -
Location Contig656: 58413-59461
Sequence    

Annotation

kegg
ID egr:104432644
description phosphoinositide phospholipase C 4-like
nr
ID XP_012067517.1
description PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
swissprot
ID Q8GV43
description Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2
trembl
ID A0A067LNP3
description Phosphoinositide phospholipase C OS=Jatropha curcas GN=JCGZ_08462 PE=4 SV=1
Gene Ontology
ID GO:0005622
description phosphoinositide phospholipase c 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_090 0.0 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
2 Hb_008447_030 0.1134785718 - - -
3 Hb_012627_020 0.1210449451 - - PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
4 Hb_000160_160 0.1273816639 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Jatropha curcas]
5 Hb_003030_030 0.1501536509 - - -
6 Hb_008447_040 0.1577534874 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
7 Hb_026745_020 0.1604005391 - - PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Jatropha curcas]
8 Hb_004303_040 0.1639750062 - - PREDICTED: fumarate hydratase 1, mitochondrial [Jatropha curcas]
9 Hb_003606_060 0.1695752157 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
10 Hb_002200_040 0.1716847125 - - PREDICTED: uncharacterized protein LOC105629143 isoform X1 [Jatropha curcas]
11 Hb_004448_090 0.172871122 - - PREDICTED: glucosidase 2 subunit beta [Jatropha curcas]
12 Hb_127552_060 0.1739278284 transcription factor TF Family: SWI/SNF-BAF60b protein binding protein, putative [Ricinus communis]
13 Hb_002200_050 0.1763651401 - - unknown [Lotus japonicus]
14 Hb_001799_200 0.1850430103 - - PREDICTED: tRNA wybutosine-synthesizing protein 4 [Jatropha curcas]
15 Hb_000684_440 0.1864310952 - - hypothetical protein CICLE_v100111082mg, partial [Citrus clementina]
16 Hb_142328_010 0.1864833474 - - PREDICTED: uncharacterized protein LOC105630513 isoform X1 [Jatropha curcas]
17 Hb_004060_030 0.1917392398 - - PREDICTED: primase homolog protein [Jatropha curcas]
18 Hb_000062_140 0.1921503079 transcription factor TF Family: GRAS hypothetical protein JCGZ_17897 [Jatropha curcas]
19 Hb_004445_020 0.1922913609 - - hypothetical protein JCGZ_13166 [Jatropha curcas]
20 Hb_004333_050 0.1939282211 - - -

Gene co-expression network

sample Hb_000656_090 Hb_000656_090 Hb_008447_030 Hb_008447_030 Hb_000656_090--Hb_008447_030 Hb_012627_020 Hb_012627_020 Hb_000656_090--Hb_012627_020 Hb_000160_160 Hb_000160_160 Hb_000656_090--Hb_000160_160 Hb_003030_030 Hb_003030_030 Hb_000656_090--Hb_003030_030 Hb_008447_040 Hb_008447_040 Hb_000656_090--Hb_008447_040 Hb_026745_020 Hb_026745_020 Hb_000656_090--Hb_026745_020 Hb_008447_030--Hb_026745_020 Hb_006274_040 Hb_006274_040 Hb_008447_030--Hb_006274_040 Hb_002200_040 Hb_002200_040 Hb_008447_030--Hb_002200_040 Hb_008447_030--Hb_000160_160 Hb_008447_030--Hb_008447_040 Hb_012627_020--Hb_000160_160 Hb_004333_050 Hb_004333_050 Hb_012627_020--Hb_004333_050 Hb_127552_060 Hb_127552_060 Hb_012627_020--Hb_127552_060 Hb_012627_020--Hb_008447_040 Hb_012627_020--Hb_008447_030 Hb_002200_050 Hb_002200_050 Hb_000160_160--Hb_002200_050 Hb_000329_560 Hb_000329_560 Hb_000160_160--Hb_000329_560 Hb_025190_010 Hb_025190_010 Hb_000160_160--Hb_025190_010 Hb_003141_070 Hb_003141_070 Hb_003030_030--Hb_003141_070 Hb_004445_020 Hb_004445_020 Hb_003030_030--Hb_004445_020 Hb_000105_120 Hb_000105_120 Hb_003030_030--Hb_000105_120 Hb_015978_110 Hb_015978_110 Hb_003030_030--Hb_015978_110 Hb_003606_060 Hb_003606_060 Hb_003030_030--Hb_003606_060 Hb_008447_040--Hb_127552_060 Hb_004448_090 Hb_004448_090 Hb_008447_040--Hb_004448_090 Hb_007023_030 Hb_007023_030 Hb_008447_040--Hb_007023_030 Hb_000429_150 Hb_000429_150 Hb_008447_040--Hb_000429_150 Hb_000236_310 Hb_000236_310 Hb_008447_040--Hb_000236_310 Hb_002414_060 Hb_002414_060 Hb_008447_040--Hb_002414_060 Hb_005701_060 Hb_005701_060 Hb_026745_020--Hb_005701_060 Hb_004060_030 Hb_004060_030 Hb_026745_020--Hb_004060_030 Hb_004303_040 Hb_004303_040 Hb_026745_020--Hb_004303_040 Hb_000193_270 Hb_000193_270 Hb_026745_020--Hb_000193_270 Hb_162603_010 Hb_162603_010 Hb_026745_020--Hb_162603_010 Hb_025194_100 Hb_025194_100 Hb_026745_020--Hb_025194_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.490033 0.16299 0.534036 2.33179 0.648147 4.31906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.19209 1.03321 1.35631 1.78938 3.86714

CAGE analysis