Hb_133385_010

Information

Type -
Description -
Location Contig133385: 162-605
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133385_010 0.0 - - -
2 Hb_001821_130 0.2241450144 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
3 Hb_155256_020 0.2286922087 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
4 Hb_002805_130 0.2300011186 - - conserved hypothetical protein [Ricinus communis]
5 Hb_006132_020 0.2342099181 - - PREDICTED: U-box domain-containing protein 37-like isoform X1 [Populus euphratica]
6 Hb_001625_030 0.2366457226 - - hypothetical protein JCGZ_20707 [Jatropha curcas]
7 Hb_007234_010 0.2380576454 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
8 Hb_002233_020 0.2407410509 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
9 Hb_001662_180 0.2449378303 - - PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5 [Citrus sinensis]
10 Hb_143489_020 0.2462228649 - - -
11 Hb_000320_460 0.2464040709 - - PREDICTED: uncharacterized protein LOC105650098 [Jatropha curcas]
12 Hb_015183_080 0.2474663564 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_002095_070 0.2480063449 - - PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Jatropha curcas]
14 Hb_014834_060 0.2491376846 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
15 Hb_002986_060 0.2514395753 - - hypothetical protein M569_15879, partial [Genlisea aurea]
16 Hb_005116_110 0.2543830224 - - PREDICTED: uncharacterized protein LOC105640215 [Jatropha curcas]
17 Hb_027337_090 0.2546966887 - - PREDICTED: sodium/hydrogen exchanger 7-like [Malus domestica]
18 Hb_000940_160 0.255886001 - - hypothetical protein VITISV_017596 [Vitis vinifera]
19 Hb_029243_020 0.2561808224 - - ENTH/VHS/GAT family protein [Theobroma cacao]
20 Hb_000566_190 0.2568768455 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_133385_010 Hb_133385_010 Hb_001821_130 Hb_001821_130 Hb_133385_010--Hb_001821_130 Hb_155256_020 Hb_155256_020 Hb_133385_010--Hb_155256_020 Hb_002805_130 Hb_002805_130 Hb_133385_010--Hb_002805_130 Hb_006132_020 Hb_006132_020 Hb_133385_010--Hb_006132_020 Hb_001625_030 Hb_001625_030 Hb_133385_010--Hb_001625_030 Hb_007234_010 Hb_007234_010 Hb_133385_010--Hb_007234_010 Hb_002960_080 Hb_002960_080 Hb_001821_130--Hb_002960_080 Hb_006117_080 Hb_006117_080 Hb_001821_130--Hb_006117_080 Hb_000321_150 Hb_000321_150 Hb_001821_130--Hb_000321_150 Hb_007575_080 Hb_007575_080 Hb_001821_130--Hb_007575_080 Hb_000661_130 Hb_000661_130 Hb_001821_130--Hb_000661_130 Hb_043362_010 Hb_043362_010 Hb_001821_130--Hb_043362_010 Hb_155256_020--Hb_002805_130 Hb_005137_030 Hb_005137_030 Hb_155256_020--Hb_005137_030 Hb_155256_020--Hb_001821_130 Hb_010874_040 Hb_010874_040 Hb_155256_020--Hb_010874_040 Hb_001999_280 Hb_001999_280 Hb_155256_020--Hb_001999_280 Hb_000189_100 Hb_000189_100 Hb_002805_130--Hb_000189_100 Hb_000540_110 Hb_000540_110 Hb_002805_130--Hb_000540_110 Hb_002805_130--Hb_007234_010 Hb_000940_160 Hb_000940_160 Hb_002805_130--Hb_000940_160 Hb_004228_020 Hb_004228_020 Hb_002805_130--Hb_004228_020 Hb_007818_020 Hb_007818_020 Hb_002805_130--Hb_007818_020 Hb_000200_110 Hb_000200_110 Hb_006132_020--Hb_000200_110 Hb_001488_040 Hb_001488_040 Hb_006132_020--Hb_001488_040 Hb_001341_160 Hb_001341_160 Hb_006132_020--Hb_001341_160 Hb_002005_120 Hb_002005_120 Hb_006132_020--Hb_002005_120 Hb_002233_020 Hb_002233_020 Hb_006132_020--Hb_002233_020 Hb_000617_190 Hb_000617_190 Hb_006132_020--Hb_000617_190 Hb_001625_030--Hb_001821_130 Hb_003090_260 Hb_003090_260 Hb_001625_030--Hb_003090_260 Hb_011671_410 Hb_011671_410 Hb_001625_030--Hb_011671_410 Hb_002157_080 Hb_002157_080 Hb_001625_030--Hb_002157_080 Hb_002542_110 Hb_002542_110 Hb_001625_030--Hb_002542_110 Hb_005725_210 Hb_005725_210 Hb_001625_030--Hb_005725_210 Hb_004204_010 Hb_004204_010 Hb_007234_010--Hb_004204_010 Hb_029243_020 Hb_029243_020 Hb_007234_010--Hb_029243_020 Hb_003047_020 Hb_003047_020 Hb_007234_010--Hb_003047_020 Hb_008053_040 Hb_008053_040 Hb_007234_010--Hb_008053_040 Hb_015183_080 Hb_015183_080 Hb_007234_010--Hb_015183_080 Hb_001488_180 Hb_001488_180 Hb_007234_010--Hb_001488_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.65309 1.28961 0.428063 0.464669 2.56229
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.657475 0.258213 0.851314 1.35979 1.87452

CAGE analysis