Hb_112064_010

Information

Type -
Description -
Location Contig112064: 8474-15269
Sequence    

Annotation

kegg
ID pop:POPTR_0006s01600g
description POPTRDRAFT_716898; inositol-1-monophosphatase family protein
nr
ID XP_012078078.1
description PREDICTED: inositol-phosphate phosphatase [Jatropha curcas]
swissprot
ID O49071
description Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1
trembl
ID A0A067K9K2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13692 PE=4 SV=1
Gene Ontology
ID GO:0005829
description l-galactose-1-phosphate phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03645: 8600-15288
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112064_010 0.0 - - PREDICTED: inositol-phosphate phosphatase [Jatropha curcas]
2 Hb_003050_360 0.0893008488 - - PREDICTED: tobamovirus multiplication protein 1 isoform X2 [Jatropha curcas]
3 Hb_001360_030 0.1119201423 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
4 Hb_000635_050 0.1170093768 - - PREDICTED: F-box/kelch-repeat protein At1g67480 [Jatropha curcas]
5 Hb_002942_140 0.1185966173 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
6 Hb_034579_020 0.1189345124 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000115_360 0.119836662 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
8 Hb_000310_060 0.1227330205 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
9 Hb_000753_110 0.1235416845 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X6 [Jatropha curcas]
10 Hb_001775_120 0.1251314688 - - PREDICTED: nucleobase-ascorbate transporter 12 [Jatropha curcas]
11 Hb_010632_020 0.1258965386 - - hypothetical protein POPTR_0006s185902g, partial [Populus trichocarpa]
12 Hb_003053_070 0.1264285032 - - PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic [Jatropha curcas]
13 Hb_000357_070 0.1308667642 - - -
14 Hb_002391_320 0.1311659302 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
15 Hb_003175_070 0.1313642116 - - pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
16 Hb_001365_020 0.1334695969 - - hypothetical protein PRUPE_ppa000927mg [Prunus persica]
17 Hb_005276_070 0.1336101707 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
18 Hb_001754_120 0.1337033662 - - PREDICTED: probable protein phosphatase 2C 40 [Jatropha curcas]
19 Hb_007101_260 0.1346761618 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
20 Hb_009193_010 0.1348052241 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]

Gene co-expression network

sample Hb_112064_010 Hb_112064_010 Hb_003050_360 Hb_003050_360 Hb_112064_010--Hb_003050_360 Hb_001360_030 Hb_001360_030 Hb_112064_010--Hb_001360_030 Hb_000635_050 Hb_000635_050 Hb_112064_010--Hb_000635_050 Hb_002942_140 Hb_002942_140 Hb_112064_010--Hb_002942_140 Hb_034579_020 Hb_034579_020 Hb_112064_010--Hb_034579_020 Hb_000115_360 Hb_000115_360 Hb_112064_010--Hb_000115_360 Hb_000689_050 Hb_000689_050 Hb_003050_360--Hb_000689_050 Hb_007101_260 Hb_007101_260 Hb_003050_360--Hb_007101_260 Hb_004545_080 Hb_004545_080 Hb_003050_360--Hb_004545_080 Hb_011174_040 Hb_011174_040 Hb_003050_360--Hb_011174_040 Hb_001377_530 Hb_001377_530 Hb_003050_360--Hb_001377_530 Hb_010632_020 Hb_010632_020 Hb_001360_030--Hb_010632_020 Hb_001365_020 Hb_001365_020 Hb_001360_030--Hb_001365_020 Hb_002636_060 Hb_002636_060 Hb_001360_030--Hb_002636_060 Hb_005276_070 Hb_005276_070 Hb_001360_030--Hb_005276_070 Hb_001365_030 Hb_001365_030 Hb_001360_030--Hb_001365_030 Hb_000357_070 Hb_000357_070 Hb_000635_050--Hb_000357_070 Hb_004678_010 Hb_004678_010 Hb_000635_050--Hb_004678_010 Hb_017098_040 Hb_017098_040 Hb_000635_050--Hb_017098_040 Hb_002026_030 Hb_002026_030 Hb_000635_050--Hb_002026_030 Hb_007765_130 Hb_007765_130 Hb_000635_050--Hb_007765_130 Hb_003055_070 Hb_003055_070 Hb_000635_050--Hb_003055_070 Hb_002942_140--Hb_004545_080 Hb_002942_140--Hb_003050_360 Hb_000230_530 Hb_000230_530 Hb_002942_140--Hb_000230_530 Hb_003175_070 Hb_003175_070 Hb_002942_140--Hb_003175_070 Hb_002942_140--Hb_010632_020 Hb_034579_020--Hb_000357_070 Hb_012180_060 Hb_012180_060 Hb_034579_020--Hb_012180_060 Hb_034579_020--Hb_003050_360 Hb_034579_020--Hb_004545_080 Hb_002374_450 Hb_002374_450 Hb_034579_020--Hb_002374_450 Hb_003020_250 Hb_003020_250 Hb_034579_020--Hb_003020_250 Hb_033152_110 Hb_033152_110 Hb_000115_360--Hb_033152_110 Hb_000622_060 Hb_000622_060 Hb_000115_360--Hb_000622_060 Hb_002391_320 Hb_002391_320 Hb_000115_360--Hb_002391_320 Hb_003226_200 Hb_003226_200 Hb_000115_360--Hb_003226_200 Hb_004129_010 Hb_004129_010 Hb_000115_360--Hb_004129_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.26226 12.4641 36.1085 25.1167 1.89039 2.48788
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.73061 2.90634 5.57538 15.6588 33.4895

CAGE analysis