Hb_092891_010

Information

Type -
Description -
Location Contig92891: 275-541
Sequence    

Annotation

kegg
ID tcc:TCM_031298
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
nr
ID XP_007021245.1
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061F605
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase OS=Theobroma cacao GN=TCM_031298 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092891_010 0.0 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
2 Hb_002768_090 0.2425280125 - - PREDICTED: transcription initiation factor TFIID subunit 11 [Jatropha curcas]
3 Hb_000099_070 0.274159336 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
4 Hb_001449_100 0.2826391031 - - PREDICTED: transcription factor bHLH149 [Jatropha curcas]
5 Hb_000116_040 0.2827879522 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
6 Hb_000694_060 0.2867500601 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]
7 Hb_007017_010 0.2909234277 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
8 Hb_002217_460 0.2943074201 - - PREDICTED: transcription factor bHLH147-like [Jatropha curcas]
9 Hb_033834_050 0.29717973 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001635_130 0.2987049046 - - PREDICTED: 60S ribosomal protein L28-2-like [Jatropha curcas]
11 Hb_000042_360 0.2987297983 - - conserved hypothetical protein [Ricinus communis]
12 Hb_017491_020 0.2993417492 - - hypothetical protein B456_011G056700 [Gossypium raimondii]
13 Hb_002900_130 0.3003703862 - - 60S ribosomal L35a-3 -like protein [Gossypium arboreum]
14 Hb_027684_020 0.3044835092 - - ribosomal protein S10 (mitochondrion) [Nicotiana tabacum]
15 Hb_007317_080 0.3062019995 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
16 Hb_005054_040 0.3073782238 - - PREDICTED: 60S ribosomal protein L35a-1 [Gossypium raimondii]
17 Hb_001269_490 0.3076038958 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007254_030 0.3098493725 - - kinase, putative [Ricinus communis]
19 Hb_003398_020 0.3101602255 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
20 Hb_164646_010 0.312429778 - - PREDICTED: acidic endochitinase-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_092891_010 Hb_092891_010 Hb_002768_090 Hb_002768_090 Hb_092891_010--Hb_002768_090 Hb_000099_070 Hb_000099_070 Hb_092891_010--Hb_000099_070 Hb_001449_100 Hb_001449_100 Hb_092891_010--Hb_001449_100 Hb_000116_040 Hb_000116_040 Hb_092891_010--Hb_000116_040 Hb_000694_060 Hb_000694_060 Hb_092891_010--Hb_000694_060 Hb_007017_010 Hb_007017_010 Hb_092891_010--Hb_007017_010 Hb_017491_020 Hb_017491_020 Hb_002768_090--Hb_017491_020 Hb_000077_180 Hb_000077_180 Hb_002768_090--Hb_000077_180 Hb_007441_240 Hb_007441_240 Hb_002768_090--Hb_007441_240 Hb_000377_120 Hb_000377_120 Hb_002768_090--Hb_000377_120 Hb_000739_140 Hb_000739_140 Hb_002768_090--Hb_000739_140 Hb_000210_060 Hb_000210_060 Hb_002768_090--Hb_000210_060 Hb_000099_070--Hb_000116_040 Hb_008772_010 Hb_008772_010 Hb_000099_070--Hb_008772_010 Hb_006006_050 Hb_006006_050 Hb_000099_070--Hb_006006_050 Hb_002235_080 Hb_002235_080 Hb_000099_070--Hb_002235_080 Hb_000099_070--Hb_007017_010 Hb_011236_010 Hb_011236_010 Hb_000099_070--Hb_011236_010 Hb_028271_020 Hb_028271_020 Hb_001449_100--Hb_028271_020 Hb_004679_060 Hb_004679_060 Hb_001449_100--Hb_004679_060 Hb_002784_100 Hb_002784_100 Hb_001449_100--Hb_002784_100 Hb_011609_110 Hb_011609_110 Hb_001449_100--Hb_011609_110 Hb_003398_020 Hb_003398_020 Hb_001449_100--Hb_003398_020 Hb_001449_100--Hb_007017_010 Hb_000116_040--Hb_000377_120 Hb_027684_020 Hb_027684_020 Hb_000116_040--Hb_027684_020 Hb_001269_490 Hb_001269_490 Hb_000116_040--Hb_001269_490 Hb_000116_040--Hb_008772_010 Hb_001410_060 Hb_001410_060 Hb_000116_040--Hb_001410_060 Hb_000136_350 Hb_000136_350 Hb_000116_040--Hb_000136_350 Hb_002374_380 Hb_002374_380 Hb_000694_060--Hb_002374_380 Hb_000868_100 Hb_000868_100 Hb_000694_060--Hb_000868_100 Hb_000694_060--Hb_007017_010 Hb_008948_120 Hb_008948_120 Hb_000694_060--Hb_008948_120 Hb_000948_080 Hb_000948_080 Hb_000694_060--Hb_000948_080 Hb_002236_050 Hb_002236_050 Hb_000694_060--Hb_002236_050 Hb_007017_010--Hb_002235_080 Hb_003327_050 Hb_003327_050 Hb_007017_010--Hb_003327_050 Hb_000028_100 Hb_000028_100 Hb_007017_010--Hb_000028_100 Hb_000487_230 Hb_000487_230 Hb_007017_010--Hb_000487_230 Hb_183612_060 Hb_183612_060 Hb_007017_010--Hb_183612_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.99149 6.326 4.74311 14.8827 0.440227 9.81536
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.0258 53.5363 2.15627 25.2174 2.32277

CAGE analysis