Hb_086765_010

Information

Type -
Description -
Location Contig86765: 671-868
Sequence    

Annotation

kegg
ID pop:POPTR_0014s16630g
description POPTRDRAFT_664894; hypothetical protein
nr
ID XP_012081497.1
description PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
swissprot
ID Q9SDM9
description Nitrile-specifier protein 1 OS=Arabidopsis thaliana GN=NSP1 PE=2 SV=2
trembl
ID A0A067K4G6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18512 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nitrile-specifier protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086765_010 0.0 - - PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
2 Hb_181328_010 0.1337535225 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_013358_090 0.1460324142 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
4 Hb_002027_180 0.1489580093 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
5 Hb_013358_080 0.1632158651 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
6 Hb_116420_040 0.1671055995 - - conserved hypothetical protein [Ricinus communis]
7 Hb_102591_010 0.1701297218 - - hypothetical protein JCGZ_09876 [Jatropha curcas]
8 Hb_004306_040 0.1713475341 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
9 Hb_181441_010 0.1719806389 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
10 Hb_008484_010 0.1760724661 - - hypothetical protein B456_008G050700 [Gossypium raimondii]
11 Hb_028707_080 0.1829374966 - - plasma membrane aquaporin 1 [Hevea brasiliensis]
12 Hb_008749_030 0.183186853 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
13 Hb_002400_330 0.1834176256 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X2 [Jatropha curcas]
14 Hb_004228_100 0.1836858067 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
15 Hb_041828_010 0.1866224537 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
16 Hb_005170_010 0.1895977181 - - -
17 Hb_004117_160 0.1907738557 transcription factor TF Family: B3 B3 domain-containing transcription repressor VAL2 -like protein [Gossypium arboreum]
18 Hb_006629_010 0.1919107098 - - Glutathione S-transferase 2 isoform 3 [Theobroma cacao]
19 Hb_009119_040 0.192473824 - - PREDICTED: tobamovirus multiplication protein 2A [Jatropha curcas]
20 Hb_002213_040 0.1934952826 - - cinnamoyl-CoA reductase [Hevea brasiliensis]

Gene co-expression network

sample Hb_086765_010 Hb_086765_010 Hb_181328_010 Hb_181328_010 Hb_086765_010--Hb_181328_010 Hb_013358_090 Hb_013358_090 Hb_086765_010--Hb_013358_090 Hb_002027_180 Hb_002027_180 Hb_086765_010--Hb_002027_180 Hb_013358_080 Hb_013358_080 Hb_086765_010--Hb_013358_080 Hb_116420_040 Hb_116420_040 Hb_086765_010--Hb_116420_040 Hb_102591_010 Hb_102591_010 Hb_086765_010--Hb_102591_010 Hb_002611_020 Hb_002611_020 Hb_181328_010--Hb_002611_020 Hb_181328_010--Hb_013358_090 Hb_002400_330 Hb_002400_330 Hb_181328_010--Hb_002400_330 Hb_106415_010 Hb_106415_010 Hb_181328_010--Hb_106415_010 Hb_050912_010 Hb_050912_010 Hb_181328_010--Hb_050912_010 Hb_013358_090--Hb_013358_080 Hb_099878_050 Hb_099878_050 Hb_013358_090--Hb_099878_050 Hb_000053_030 Hb_000053_030 Hb_013358_090--Hb_000053_030 Hb_013358_090--Hb_002027_180 Hb_004040_030 Hb_004040_030 Hb_013358_090--Hb_004040_030 Hb_003992_040 Hb_003992_040 Hb_002027_180--Hb_003992_040 Hb_026228_020 Hb_026228_020 Hb_002027_180--Hb_026228_020 Hb_001829_040 Hb_001829_040 Hb_002027_180--Hb_001829_040 Hb_004117_160 Hb_004117_160 Hb_002027_180--Hb_004117_160 Hb_081517_010 Hb_081517_010 Hb_013358_080--Hb_081517_010 Hb_013358_080--Hb_181328_010 Hb_001948_130 Hb_001948_130 Hb_013358_080--Hb_001948_130 Hb_111973_010 Hb_111973_010 Hb_013358_080--Hb_111973_010 Hb_074197_020 Hb_074197_020 Hb_013358_080--Hb_074197_020 Hb_000608_260 Hb_000608_260 Hb_116420_040--Hb_000608_260 Hb_000069_570 Hb_000069_570 Hb_116420_040--Hb_000069_570 Hb_001349_030 Hb_001349_030 Hb_116420_040--Hb_001349_030 Hb_001194_020 Hb_001194_020 Hb_116420_040--Hb_001194_020 Hb_005048_140 Hb_005048_140 Hb_116420_040--Hb_005048_140 Hb_001059_130 Hb_001059_130 Hb_116420_040--Hb_001059_130 Hb_165402_010 Hb_165402_010 Hb_102591_010--Hb_165402_010 Hb_102591_010--Hb_181328_010 Hb_050034_010 Hb_050034_010 Hb_102591_010--Hb_050034_010 Hb_102591_010--Hb_002611_020 Hb_000077_290 Hb_000077_290 Hb_102591_010--Hb_000077_290 Hb_007456_020 Hb_007456_020 Hb_102591_010--Hb_007456_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.8818 63.0966 19.2814 140.916 38.1525 139.746
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.7421 8.70801 12.0478 37.2613 79.4085

CAGE analysis