Hb_102591_010

Information

Type -
Description -
Location Contig102591: 2-364
Sequence    

Annotation

kegg
ID rcu:RCOM_1381650
description hypothetical protein
nr
ID KDP35904.1
description hypothetical protein JCGZ_09876 [Jatropha curcas]
swissprot
ID Q9ZQR5
description Protein trichome birefringence-like 13 OS=Arabidopsis thaliana GN=TBL13 PE=2 SV=1
trembl
ID A0A067KVL6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09876 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_102591_010 0.0 - - hypothetical protein JCGZ_09876 [Jatropha curcas]
2 Hb_165402_010 0.1373071173 - - PREDICTED: cullin-1 isoform X3 [Nicotiana sylvestris]
3 Hb_181328_010 0.1399636819 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_050034_010 0.1407873324 - - PREDICTED: cullin-1 [Jatropha curcas]
5 Hb_002611_020 0.1408627936 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [Populus euphratica]
6 Hb_000077_290 0.143145491 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007456_020 0.1467607014 - - unknown [Lotus japonicus]
8 Hb_005170_010 0.1477233332 - - -
9 Hb_013358_090 0.1478112827 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
10 Hb_031931_020 0.1500026531 - - Minor histocompatibility antigen H13, putative [Ricinus communis]
11 Hb_060391_010 0.1511146829 - - nucleic acid binding protein, putative [Ricinus communis]
12 Hb_099116_010 0.1515289538 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000230_180 0.1586910319 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
14 Hb_100137_010 0.1610880335 - - hypothetical protein JCGZ_17848 [Jatropha curcas]
15 Hb_010003_010 0.1642800413 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
16 Hb_004040_030 0.1643828262 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
17 Hb_002477_050 0.1651738641 - - unnamed protein product [Coffea canephora]
18 Hb_000035_330 0.1689431431 - - Transmembrane protein 85 [Theobroma cacao]
19 Hb_086765_010 0.1701297218 - - PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
20 Hb_000720_080 0.1719770108 - - PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_102591_010 Hb_102591_010 Hb_165402_010 Hb_165402_010 Hb_102591_010--Hb_165402_010 Hb_181328_010 Hb_181328_010 Hb_102591_010--Hb_181328_010 Hb_050034_010 Hb_050034_010 Hb_102591_010--Hb_050034_010 Hb_002611_020 Hb_002611_020 Hb_102591_010--Hb_002611_020 Hb_000077_290 Hb_000077_290 Hb_102591_010--Hb_000077_290 Hb_007456_020 Hb_007456_020 Hb_102591_010--Hb_007456_020 Hb_181441_010 Hb_181441_010 Hb_165402_010--Hb_181441_010 Hb_106688_010 Hb_106688_010 Hb_165402_010--Hb_106688_010 Hb_075764_010 Hb_075764_010 Hb_165402_010--Hb_075764_010 Hb_000230_180 Hb_000230_180 Hb_165402_010--Hb_000230_180 Hb_077573_010 Hb_077573_010 Hb_165402_010--Hb_077573_010 Hb_165402_010--Hb_002611_020 Hb_181328_010--Hb_002611_020 Hb_013358_090 Hb_013358_090 Hb_181328_010--Hb_013358_090 Hb_002400_330 Hb_002400_330 Hb_181328_010--Hb_002400_330 Hb_106415_010 Hb_106415_010 Hb_181328_010--Hb_106415_010 Hb_086765_010 Hb_086765_010 Hb_181328_010--Hb_086765_010 Hb_050912_010 Hb_050912_010 Hb_181328_010--Hb_050912_010 Hb_050034_010--Hb_007456_020 Hb_099116_010 Hb_099116_010 Hb_050034_010--Hb_099116_010 Hb_050034_010--Hb_165402_010 Hb_000168_010 Hb_000168_010 Hb_050034_010--Hb_000168_010 Hb_060391_010 Hb_060391_010 Hb_050034_010--Hb_060391_010 Hb_002611_020--Hb_000230_180 Hb_002611_020--Hb_002400_330 Hb_002122_010 Hb_002122_010 Hb_002611_020--Hb_002122_010 Hb_005170_010 Hb_005170_010 Hb_002611_020--Hb_005170_010 Hb_000696_010 Hb_000696_010 Hb_002611_020--Hb_000696_010 Hb_000077_290--Hb_005170_010 Hb_000077_290--Hb_000230_180 Hb_004525_040 Hb_004525_040 Hb_000077_290--Hb_004525_040 Hb_012194_060 Hb_012194_060 Hb_000077_290--Hb_012194_060 Hb_000035_330 Hb_000035_330 Hb_000077_290--Hb_000035_330 Hb_000889_100 Hb_000889_100 Hb_000077_290--Hb_000889_100 Hb_007456_020--Hb_099116_010 Hb_169656_010 Hb_169656_010 Hb_007456_020--Hb_169656_010 Hb_003780_020 Hb_003780_020 Hb_007456_020--Hb_003780_020 Hb_007456_020--Hb_000168_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.33398 3.25917 3.17815 21.2502 5.19226 11.6982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.41967 1.52094 0.883053 8.50255 6.76814

CAGE analysis