Hb_061350_010

Information

Type -
Description -
Location Contig61350: 1674-5790
Sequence    

Annotation

kegg
ID rcu:RCOM_1045150
description TMV resistance protein N, putative
nr
ID XP_012065766.1
description PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
swissprot
ID O23530
description Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
trembl
ID A0A067LFQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25445 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061350_010 0.0 - - PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
2 Hb_027556_040 0.1304060881 - - PREDICTED: pleiotropic drug resistance protein 1-like [Vitis vinifera]
3 Hb_001754_200 0.1542083051 - - PREDICTED: U1 small nuclear ribonucleoprotein C [Jatropha curcas]
4 Hb_004767_060 0.1639518409 - - PREDICTED: uncharacterized protein LOC105761928 [Gossypium raimondii]
5 Hb_002329_030 0.1716676802 - - PREDICTED: pleiotropic drug resistance protein 2-like isoform X1 [Jatropha curcas]
6 Hb_003142_090 0.1743839423 - - Kinase, putative isoform 2 [Theobroma cacao]
7 Hb_000819_010 0.1750085485 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
8 Hb_010921_060 0.1762279159 - - ATP binding protein, putative [Ricinus communis]
9 Hb_002239_020 0.1762894611 - - MLO, putative [Theobroma cacao]
10 Hb_006316_030 0.1795829612 - - aldehyde oxidase, putative [Ricinus communis]
11 Hb_009803_030 0.1834017547 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
12 Hb_002218_070 0.184466767 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
13 Hb_002045_220 0.1856467199 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
14 Hb_002600_010 0.1866804684 - - Allene oxide cyclase 4, chloroplast precursor, putative [Ricinus communis]
15 Hb_000563_120 0.187711099 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
16 Hb_006615_190 0.1885528564 - - UDP-glycosyltransferase 1 [Linum usitatissimum]
17 Hb_007237_090 0.1889201479 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000668_160 0.191022841 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
19 Hb_084127_010 0.1910242216 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_011344_140 0.1913313771 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]

Gene co-expression network

sample Hb_061350_010 Hb_061350_010 Hb_027556_040 Hb_027556_040 Hb_061350_010--Hb_027556_040 Hb_001754_200 Hb_001754_200 Hb_061350_010--Hb_001754_200 Hb_004767_060 Hb_004767_060 Hb_061350_010--Hb_004767_060 Hb_002329_030 Hb_002329_030 Hb_061350_010--Hb_002329_030 Hb_003142_090 Hb_003142_090 Hb_061350_010--Hb_003142_090 Hb_000819_010 Hb_000819_010 Hb_061350_010--Hb_000819_010 Hb_002218_070 Hb_002218_070 Hb_027556_040--Hb_002218_070 Hb_006316_030 Hb_006316_030 Hb_027556_040--Hb_006316_030 Hb_117840_010 Hb_117840_010 Hb_027556_040--Hb_117840_010 Hb_038777_010 Hb_038777_010 Hb_027556_040--Hb_038777_010 Hb_003497_020 Hb_003497_020 Hb_027556_040--Hb_003497_020 Hb_000094_010 Hb_000094_010 Hb_001754_200--Hb_000094_010 Hb_002571_010 Hb_002571_010 Hb_001754_200--Hb_002571_010 Hb_003914_050 Hb_003914_050 Hb_001754_200--Hb_003914_050 Hb_000522_130 Hb_000522_130 Hb_001754_200--Hb_000522_130 Hb_033312_090 Hb_033312_090 Hb_001754_200--Hb_033312_090 Hb_065525_010 Hb_065525_010 Hb_001754_200--Hb_065525_010 Hb_004007_230 Hb_004007_230 Hb_004767_060--Hb_004007_230 Hb_000417_150 Hb_000417_150 Hb_004767_060--Hb_000417_150 Hb_002609_130 Hb_002609_130 Hb_004767_060--Hb_002609_130 Hb_001357_360 Hb_001357_360 Hb_004767_060--Hb_001357_360 Hb_005306_020 Hb_005306_020 Hb_004767_060--Hb_005306_020 Hb_002272_070 Hb_002272_070 Hb_002329_030--Hb_002272_070 Hb_000072_160 Hb_000072_160 Hb_002329_030--Hb_000072_160 Hb_000007_210 Hb_000007_210 Hb_002329_030--Hb_000007_210 Hb_014361_130 Hb_014361_130 Hb_002329_030--Hb_014361_130 Hb_006615_190 Hb_006615_190 Hb_002329_030--Hb_006615_190 Hb_084127_010 Hb_084127_010 Hb_002329_030--Hb_084127_010 Hb_000067_030 Hb_000067_030 Hb_003142_090--Hb_000067_030 Hb_003371_140 Hb_003371_140 Hb_003142_090--Hb_003371_140 Hb_006501_170 Hb_006501_170 Hb_003142_090--Hb_006501_170 Hb_002518_270 Hb_002518_270 Hb_003142_090--Hb_002518_270 Hb_000126_040 Hb_000126_040 Hb_003142_090--Hb_000126_040 Hb_000668_160 Hb_000668_160 Hb_000819_010--Hb_000668_160 Hb_009803_030 Hb_009803_030 Hb_000819_010--Hb_009803_030 Hb_000280_110 Hb_000280_110 Hb_000819_010--Hb_000280_110 Hb_010921_060 Hb_010921_060 Hb_000819_010--Hb_010921_060 Hb_008040_060 Hb_008040_060 Hb_000819_010--Hb_008040_060 Hb_000819_010--Hb_000522_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.440549 0.0592269 0.118849 0.0188127 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0337283 0 0.175801 0.139235

CAGE analysis