Hb_044653_080

Information

Type -
Description -
Location Contig44653: 59717-60297
Sequence    

Annotation

kegg
ID tcc:TCM_045144
description hypothetical protein
nr
ID XP_007010992.1
description Uncharacterized protein TCM_045144 [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061FSW9
description Uncharacterized protein OS=Theobroma cacao GN=TCM_045144 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43071: 59732-59875
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044653_080 0.0 - - Uncharacterized protein TCM_045144 [Theobroma cacao]
2 Hb_004193_010 0.2196536663 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
3 Hb_092408_010 0.2442134052 transcription factor TF Family: TRAF PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X2 [Jatropha curcas]
4 Hb_002026_010 0.2567128745 transcription factor TF Family: mTERF hypothetical protein CICLE_v10020375mg [Citrus clementina]
5 Hb_052764_040 0.2584690267 - - syntaxin 125 family protein [Populus trichocarpa]
6 Hb_000432_090 0.2637048636 - - calcium-dependent protein kinase [Hevea brasiliensis]
7 Hb_001486_010 0.2654858857 - - adenylsulfate kinase, putative [Ricinus communis]
8 Hb_004920_070 0.2712025255 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
9 Hb_010174_080 0.2735317273 - - -
10 Hb_010883_200 0.2754950448 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
11 Hb_000120_250 0.2757509833 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
12 Hb_065161_010 0.2780056274 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000010_300 0.2792103468 transcription factor TF Family: TAZ protein binding protein, putative [Ricinus communis]
14 Hb_051997_020 0.2805326375 - - PREDICTED: uncharacterized protein LOC100266863 [Vitis vinifera]
15 Hb_163839_010 0.2809882054 - - nucleic acid binding protein, putative [Ricinus communis]
16 Hb_004635_030 0.284069582 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
17 Hb_009571_010 0.2857564552 - - early-responsive to dehydration family protein [Populus trichocarpa]
18 Hb_006120_150 0.28638168 - - invertase [Hevea brasiliensis]
19 Hb_000069_240 0.2874748094 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3-like [Jatropha curcas]
20 Hb_174829_020 0.2887532639 transcription factor TF Family: C2C2-Dof cyclic dof factor 2 [Jatropha curcas]

Gene co-expression network

sample Hb_044653_080 Hb_044653_080 Hb_004193_010 Hb_004193_010 Hb_044653_080--Hb_004193_010 Hb_092408_010 Hb_092408_010 Hb_044653_080--Hb_092408_010 Hb_002026_010 Hb_002026_010 Hb_044653_080--Hb_002026_010 Hb_052764_040 Hb_052764_040 Hb_044653_080--Hb_052764_040 Hb_000432_090 Hb_000432_090 Hb_044653_080--Hb_000432_090 Hb_001486_010 Hb_001486_010 Hb_044653_080--Hb_001486_010 Hb_143813_020 Hb_143813_020 Hb_004193_010--Hb_143813_020 Hb_006120_150 Hb_006120_150 Hb_004193_010--Hb_006120_150 Hb_069591_010 Hb_069591_010 Hb_004193_010--Hb_069591_010 Hb_002478_040 Hb_002478_040 Hb_004193_010--Hb_002478_040 Hb_006545_020 Hb_006545_020 Hb_004193_010--Hb_006545_020 Hb_000979_060 Hb_000979_060 Hb_004193_010--Hb_000979_060 Hb_008643_200 Hb_008643_200 Hb_092408_010--Hb_008643_200 Hb_092408_010--Hb_000432_090 Hb_013241_010 Hb_013241_010 Hb_092408_010--Hb_013241_010 Hb_122408_010 Hb_122408_010 Hb_092408_010--Hb_122408_010 Hb_000270_510 Hb_000270_510 Hb_092408_010--Hb_000270_510 Hb_000011_400 Hb_000011_400 Hb_092408_010--Hb_000011_400 Hb_006615_070 Hb_006615_070 Hb_002026_010--Hb_006615_070 Hb_010883_200 Hb_010883_200 Hb_002026_010--Hb_010883_200 Hb_000394_110 Hb_000394_110 Hb_002026_010--Hb_000394_110 Hb_002974_040 Hb_002974_040 Hb_002026_010--Hb_002974_040 Hb_010578_010 Hb_010578_010 Hb_002026_010--Hb_010578_010 Hb_003038_250 Hb_003038_250 Hb_052764_040--Hb_003038_250 Hb_000700_030 Hb_000700_030 Hb_052764_040--Hb_000700_030 Hb_004449_140 Hb_004449_140 Hb_052764_040--Hb_004449_140 Hb_051997_020 Hb_051997_020 Hb_052764_040--Hb_051997_020 Hb_001214_190 Hb_001214_190 Hb_052764_040--Hb_001214_190 Hb_000432_090--Hb_013241_010 Hb_010872_070 Hb_010872_070 Hb_000432_090--Hb_010872_070 Hb_000976_280 Hb_000976_280 Hb_000432_090--Hb_000976_280 Hb_000987_060 Hb_000987_060 Hb_000432_090--Hb_000987_060 Hb_002217_020 Hb_002217_020 Hb_000432_090--Hb_002217_020 Hb_001856_200 Hb_001856_200 Hb_000432_090--Hb_001856_200 Hb_075247_010 Hb_075247_010 Hb_001486_010--Hb_075247_010 Hb_000788_060 Hb_000788_060 Hb_001486_010--Hb_000788_060 Hb_000239_020 Hb_000239_020 Hb_001486_010--Hb_000239_020 Hb_009111_020 Hb_009111_020 Hb_001486_010--Hb_009111_020 Hb_001221_330 Hb_001221_330 Hb_001486_010--Hb_001221_330 Hb_007262_030 Hb_007262_030 Hb_001486_010--Hb_007262_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.116508 0.320944 0.601572 0.153406 0 0.104653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.136454 0.107197 0.543678 0.0892122 0

CAGE analysis