Hb_006615_070

Information

Type -
Description -
Location Contig6615: 47504-49030
Sequence    

Annotation

kegg
ID rcu:RCOM_1466910
description hypothetical protein
nr
ID XP_002514587.1
description hypothetical protein RCOM_1466910 [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RLG8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006615_070 0.0 - - hypothetical protein RCOM_1466910 [Ricinus communis]
2 Hb_002026_010 0.2040248989 transcription factor TF Family: mTERF hypothetical protein CICLE_v10020375mg [Citrus clementina]
3 Hb_010578_010 0.220113014 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
4 Hb_000475_040 0.2382515113 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
5 Hb_000394_110 0.246685425 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
6 Hb_001123_200 0.2664279837 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007558_020 0.2669293368 - - hypothetical protein JCGZ_17631 [Jatropha curcas]
8 Hb_000510_230 0.2682847497 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
9 Hb_127194_010 0.2748900276 rubber biosynthesis Gene Name: Mevalonate kinase mevalonate kinase [Hevea brasiliensis]
10 Hb_004920_070 0.2856344215 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
11 Hb_002631_320 0.2911554195 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
12 Hb_002849_140 0.2914001186 - - hypothetical protein JCGZ_14366 [Jatropha curcas]
13 Hb_003147_070 0.2914839985 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like [Jatropha curcas]
14 Hb_004204_050 0.3019825225 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
15 Hb_000291_030 0.3072298035 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
16 Hb_000802_110 0.3103368805 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
17 Hb_002950_090 0.3105890756 - - -
18 Hb_000011_050 0.3108268594 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
19 Hb_002110_240 0.3131822651 - - clathrin assembly protein, putative [Ricinus communis]
20 Hb_000343_180 0.3139347839 - - NDWp3 [Podospora anserina]

Gene co-expression network

sample Hb_006615_070 Hb_006615_070 Hb_002026_010 Hb_002026_010 Hb_006615_070--Hb_002026_010 Hb_010578_010 Hb_010578_010 Hb_006615_070--Hb_010578_010 Hb_000475_040 Hb_000475_040 Hb_006615_070--Hb_000475_040 Hb_000394_110 Hb_000394_110 Hb_006615_070--Hb_000394_110 Hb_001123_200 Hb_001123_200 Hb_006615_070--Hb_001123_200 Hb_007558_020 Hb_007558_020 Hb_006615_070--Hb_007558_020 Hb_044653_080 Hb_044653_080 Hb_002026_010--Hb_044653_080 Hb_010883_200 Hb_010883_200 Hb_002026_010--Hb_010883_200 Hb_002026_010--Hb_000394_110 Hb_002974_040 Hb_002974_040 Hb_002026_010--Hb_002974_040 Hb_002026_010--Hb_010578_010 Hb_127194_010 Hb_127194_010 Hb_010578_010--Hb_127194_010 Hb_010578_010--Hb_001123_200 Hb_010578_010--Hb_000475_040 Hb_168978_020 Hb_168978_020 Hb_010578_010--Hb_168978_020 Hb_010578_010--Hb_000394_110 Hb_000086_340 Hb_000086_340 Hb_000475_040--Hb_000086_340 Hb_149714_010 Hb_149714_010 Hb_000475_040--Hb_149714_010 Hb_000302_260 Hb_000302_260 Hb_000475_040--Hb_000302_260 Hb_000475_040--Hb_127194_010 Hb_000475_040--Hb_001123_200 Hb_000210_010 Hb_000210_010 Hb_000475_040--Hb_000210_010 Hb_000510_230 Hb_000510_230 Hb_000394_110--Hb_000510_230 Hb_000394_110--Hb_127194_010 Hb_000057_140 Hb_000057_140 Hb_000394_110--Hb_000057_140 Hb_001959_010 Hb_001959_010 Hb_000394_110--Hb_001959_010 Hb_000394_110--Hb_007558_020 Hb_098533_020 Hb_098533_020 Hb_000394_110--Hb_098533_020 Hb_003605_240 Hb_003605_240 Hb_001123_200--Hb_003605_240 Hb_001377_360 Hb_001377_360 Hb_001123_200--Hb_001377_360 Hb_000179_240 Hb_000179_240 Hb_001123_200--Hb_000179_240 Hb_000976_280 Hb_000976_280 Hb_001123_200--Hb_000976_280 Hb_002685_200 Hb_002685_200 Hb_001123_200--Hb_002685_200 Hb_004324_300 Hb_004324_300 Hb_001123_200--Hb_004324_300 Hb_001771_080 Hb_001771_080 Hb_007558_020--Hb_001771_080 Hb_000343_180 Hb_000343_180 Hb_007558_020--Hb_000343_180 Hb_002849_140 Hb_002849_140 Hb_007558_020--Hb_002849_140 Hb_006907_080 Hb_006907_080 Hb_007558_020--Hb_006907_080 Hb_140049_010 Hb_140049_010 Hb_007558_020--Hb_140049_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.285652 1.30501 1.31831 0 0 0.129221
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.673629 0.92594 0.434572 0.27916 0

CAGE analysis