Hb_030312_010

Information

Type -
Description -
Location Contig30312: 6930-7301
Sequence    

Annotation

kegg
ID rcu:RCOM_0774210
description hypothetical protein
nr
ID XP_002521845.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S776
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0774210 PE=4 SV=1
Gene Ontology
ID GO:0016491
description conserved hypothetical protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030312_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003082_040 0.1610216552 - - PREDICTED: receptor-like protein kinase HSL1 [Phoenix dactylifera]
3 Hb_000094_190 0.1762938275 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
4 Hb_063716_090 0.1769838805 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001255_010 0.1855737242 - - PREDICTED: phytosulfokine receptor 1-like [Tarenaya hassleriana]
6 Hb_000797_060 0.1883261199 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
7 Hb_001004_120 0.1886940206 - - PREDICTED: receptor-like protein kinase HERK 1 isoform X2 [Jatropha curcas]
8 Hb_001518_060 0.1896264333 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 9 [Jatropha curcas]
9 Hb_005656_160 0.1898675836 - - PREDICTED: uncharacterized protein LOC105637448 [Jatropha curcas]
10 Hb_000331_280 0.1937019384 - - AMP dependent CoA ligase, putative [Ricinus communis]
11 Hb_001754_060 0.1951179729 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
12 Hb_001103_070 0.1953483505 - - Patellin-3, putative [Ricinus communis]
13 Hb_002431_010 0.198721689 - - PREDICTED: uncharacterized protein LOC104599557 isoform X2 [Nelumbo nucifera]
14 Hb_002374_550 0.1989832904 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
15 Hb_006185_010 0.1999445236 - - hypothetical protein L484_013453 [Morus notabilis]
16 Hb_000139_180 0.2015263774 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
17 Hb_001675_320 0.2040560529 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
18 Hb_017159_010 0.2055083547 - - -
19 Hb_002311_110 0.2105158314 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000649_270 0.2106214457 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_030312_010 Hb_030312_010 Hb_003082_040 Hb_003082_040 Hb_030312_010--Hb_003082_040 Hb_000094_190 Hb_000094_190 Hb_030312_010--Hb_000094_190 Hb_063716_090 Hb_063716_090 Hb_030312_010--Hb_063716_090 Hb_001255_010 Hb_001255_010 Hb_030312_010--Hb_001255_010 Hb_000797_060 Hb_000797_060 Hb_030312_010--Hb_000797_060 Hb_001004_120 Hb_001004_120 Hb_030312_010--Hb_001004_120 Hb_002213_040 Hb_002213_040 Hb_003082_040--Hb_002213_040 Hb_003082_040--Hb_001004_120 Hb_002685_030 Hb_002685_030 Hb_003082_040--Hb_002685_030 Hb_003506_020 Hb_003506_020 Hb_003082_040--Hb_003506_020 Hb_000342_140 Hb_000342_140 Hb_003082_040--Hb_000342_140 Hb_012762_060 Hb_012762_060 Hb_000094_190--Hb_012762_060 Hb_001754_060 Hb_001754_060 Hb_000094_190--Hb_001754_060 Hb_002026_020 Hb_002026_020 Hb_000094_190--Hb_002026_020 Hb_000914_050 Hb_000914_050 Hb_000094_190--Hb_000914_050 Hb_000844_030 Hb_000844_030 Hb_000094_190--Hb_000844_030 Hb_002374_550 Hb_002374_550 Hb_000094_190--Hb_002374_550 Hb_017948_030 Hb_017948_030 Hb_063716_090--Hb_017948_030 Hb_003599_030 Hb_003599_030 Hb_063716_090--Hb_003599_030 Hb_001675_320 Hb_001675_320 Hb_063716_090--Hb_001675_320 Hb_005539_310 Hb_005539_310 Hb_063716_090--Hb_005539_310 Hb_000203_270 Hb_000203_270 Hb_063716_090--Hb_000203_270 Hb_004987_020 Hb_004987_020 Hb_063716_090--Hb_004987_020 Hb_002250_050 Hb_002250_050 Hb_001255_010--Hb_002250_050 Hb_017159_010 Hb_017159_010 Hb_001255_010--Hb_017159_010 Hb_000523_030 Hb_000523_030 Hb_001255_010--Hb_000523_030 Hb_028487_130 Hb_028487_130 Hb_001255_010--Hb_028487_130 Hb_178793_010 Hb_178793_010 Hb_001255_010--Hb_178793_010 Hb_001255_010--Hb_000203_270 Hb_000300_230 Hb_000300_230 Hb_000797_060--Hb_000300_230 Hb_002289_150 Hb_002289_150 Hb_000797_060--Hb_002289_150 Hb_000797_060--Hb_001754_060 Hb_000109_190 Hb_000109_190 Hb_000797_060--Hb_000109_190 Hb_000138_060 Hb_000138_060 Hb_000797_060--Hb_000138_060 Hb_005489_150 Hb_005489_150 Hb_000797_060--Hb_005489_150 Hb_000500_080 Hb_000500_080 Hb_001004_120--Hb_000500_080 Hb_000649_270 Hb_000649_270 Hb_001004_120--Hb_000649_270 Hb_012353_040 Hb_012353_040 Hb_001004_120--Hb_012353_040 Hb_150346_010 Hb_150346_010 Hb_001004_120--Hb_150346_010 Hb_014497_040 Hb_014497_040 Hb_001004_120--Hb_014497_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.483511 3.04519 0.888047 3.5477 1.51537 0.428169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.23005 0.361466 0 0.551004 0.928156

CAGE analysis