Hb_000797_060

Information

Type -
Description -
Location Contig797: 62542-81173
Sequence    

Annotation

kegg
ID vvi:100242816
description uncharacterized LOC100242816
nr
ID XP_012087051.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067JRT5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20709 PE=4 SV=1
Gene Ontology
ID GO:0004252
description xylem serine proteinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58584: 73922-74188
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000797_060 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_000300_230 0.1032957744 - - PREDICTED: cation/calcium exchanger 2 [Jatropha curcas]
3 Hb_002289_150 0.1128111415 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
4 Hb_001754_060 0.1268365244 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
5 Hb_000109_190 0.1508758308 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
6 Hb_000138_060 0.1537856459 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
7 Hb_005489_150 0.1572354977 - - hypothetical protein JCGZ_20759 [Jatropha curcas]
8 Hb_000805_140 0.1616188657 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
9 Hb_020805_120 0.1654550413 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
10 Hb_004449_090 0.1690777909 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
11 Hb_002217_500 0.1778637594 - - hypothetical protein JCGZ_19014 [Jatropha curcas]
12 Hb_001133_010 0.1789365896 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000094_190 0.1789469583 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
14 Hb_005539_140 0.1795258255 - - PREDICTED: U-box domain-containing protein 19-like [Jatropha curcas]
15 Hb_010812_110 0.1821591512 - - putative plant disease resistance family protein [Populus trichocarpa]
16 Hb_003975_010 0.1831493792 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
17 Hb_002217_320 0.1844723105 - - PREDICTED: probable O-acetyltransferase CAS1 isoform X2 [Jatropha curcas]
18 Hb_006185_010 0.1845307132 - - hypothetical protein L484_013453 [Morus notabilis]
19 Hb_006938_040 0.1847653453 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
20 Hb_011828_010 0.1849741503 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]

Gene co-expression network

sample Hb_000797_060 Hb_000797_060 Hb_000300_230 Hb_000300_230 Hb_000797_060--Hb_000300_230 Hb_002289_150 Hb_002289_150 Hb_000797_060--Hb_002289_150 Hb_001754_060 Hb_001754_060 Hb_000797_060--Hb_001754_060 Hb_000109_190 Hb_000109_190 Hb_000797_060--Hb_000109_190 Hb_000138_060 Hb_000138_060 Hb_000797_060--Hb_000138_060 Hb_005489_150 Hb_005489_150 Hb_000797_060--Hb_005489_150 Hb_000300_230--Hb_002289_150 Hb_000300_230--Hb_001754_060 Hb_004449_090 Hb_004449_090 Hb_000300_230--Hb_004449_090 Hb_000300_230--Hb_000138_060 Hb_000300_230--Hb_005489_150 Hb_002289_150--Hb_000138_060 Hb_002289_150--Hb_001754_060 Hb_011828_010 Hb_011828_010 Hb_002289_150--Hb_011828_010 Hb_026740_020 Hb_026740_020 Hb_002289_150--Hb_026740_020 Hb_017159_010 Hb_017159_010 Hb_001754_060--Hb_017159_010 Hb_003090_160 Hb_003090_160 Hb_001754_060--Hb_003090_160 Hb_000203_270 Hb_000203_270 Hb_001754_060--Hb_000203_270 Hb_000523_030 Hb_000523_030 Hb_001754_060--Hb_000523_030 Hb_005408_100 Hb_005408_100 Hb_000109_190--Hb_005408_100 Hb_003001_130 Hb_003001_130 Hb_000109_190--Hb_003001_130 Hb_000479_060 Hb_000479_060 Hb_000109_190--Hb_000479_060 Hb_020805_120 Hb_020805_120 Hb_000109_190--Hb_020805_120 Hb_003929_230 Hb_003929_230 Hb_000109_190--Hb_003929_230 Hb_000365_280 Hb_000365_280 Hb_000109_190--Hb_000365_280 Hb_116702_010 Hb_116702_010 Hb_000138_060--Hb_116702_010 Hb_000138_060--Hb_011828_010 Hb_001347_050 Hb_001347_050 Hb_000138_060--Hb_001347_050 Hb_002217_320 Hb_002217_320 Hb_000138_060--Hb_002217_320 Hb_005192_010 Hb_005192_010 Hb_000138_060--Hb_005192_010 Hb_005539_140 Hb_005539_140 Hb_005489_150--Hb_005539_140 Hb_011360_110 Hb_011360_110 Hb_005489_150--Hb_011360_110 Hb_005489_150--Hb_002289_150 Hb_028639_030 Hb_028639_030 Hb_005489_150--Hb_028639_030 Hb_000320_350 Hb_000320_350 Hb_005489_150--Hb_000320_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0487595 0.253931 0.0706125 0.479151 0.071484 0.0332375
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0246006 0.0484032 0.0373759 0.0478432 0.146032

CAGE analysis