Hb_027337_120

Information

Type -
Description -
Location Contig27337: 77409-78020
Sequence    

Annotation

kegg
ID egr:104430249
description uncharacterized LOC104430249
nr
ID XP_010041304.1
description PREDICTED: uncharacterized protein LOC104430249 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A067KBJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027337_120 0.0 - - PREDICTED: uncharacterized protein LOC104430249 [Eucalyptus grandis]
2 Hb_000042_100 0.1577859696 - - PREDICTED: uncharacterized protein LOC104448410 [Eucalyptus grandis]
3 Hb_002150_050 0.1741501227 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000589_160 0.174410556 - - PREDICTED: expansin-A4 [Jatropha curcas]
5 Hb_000033_040 0.1771741013 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007426_050 0.184079569 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]
7 Hb_000352_160 0.1848387838 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000563_260 0.1902496831 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
9 Hb_000046_620 0.1912785255 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
10 Hb_001369_600 0.1979218723 - - kinase, putative [Ricinus communis]
11 Hb_001348_230 0.1981352536 transcription factor TF Family: TRAF protein with unknown function [Ricinus communis]
12 Hb_012053_040 0.1995229159 - - PREDICTED: putative phospholipid:diacylglycerol acyltransferase 2 [Jatropha curcas]
13 Hb_141194_010 0.2059566128 - - PREDICTED: protein ZINC INDUCED FACILITATOR 1-like isoform X2 [Populus euphratica]
14 Hb_002588_040 0.2128047423 - - Pathogenesis-related protein 1 [Theobroma cacao]
15 Hb_001369_210 0.2130689222 transcription factor TF Family: C2H2 hypothetical protein JCGZ_26269 [Jatropha curcas]
16 Hb_001776_170 0.2136377795 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002067_140 0.2142984222 - - -
18 Hb_005520_010 0.2189332847 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
19 Hb_001143_070 0.2193139309 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
20 Hb_004942_020 0.2217609692 - - Potassium transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_027337_120 Hb_027337_120 Hb_000042_100 Hb_000042_100 Hb_027337_120--Hb_000042_100 Hb_002150_050 Hb_002150_050 Hb_027337_120--Hb_002150_050 Hb_000589_160 Hb_000589_160 Hb_027337_120--Hb_000589_160 Hb_000033_040 Hb_000033_040 Hb_027337_120--Hb_000033_040 Hb_007426_050 Hb_007426_050 Hb_027337_120--Hb_007426_050 Hb_000352_160 Hb_000352_160 Hb_027337_120--Hb_000352_160 Hb_039946_010 Hb_039946_010 Hb_000042_100--Hb_039946_010 Hb_010589_050 Hb_010589_050 Hb_000042_100--Hb_010589_050 Hb_012586_020 Hb_012586_020 Hb_000042_100--Hb_012586_020 Hb_000352_180 Hb_000352_180 Hb_000042_100--Hb_000352_180 Hb_000042_100--Hb_000352_160 Hb_061383_010 Hb_061383_010 Hb_002150_050--Hb_061383_010 Hb_001247_330 Hb_001247_330 Hb_002150_050--Hb_001247_330 Hb_001214_080 Hb_001214_080 Hb_002150_050--Hb_001214_080 Hb_000563_260 Hb_000563_260 Hb_002150_050--Hb_000563_260 Hb_001146_060 Hb_001146_060 Hb_002150_050--Hb_001146_060 Hb_012053_050 Hb_012053_050 Hb_000589_160--Hb_012053_050 Hb_012053_010 Hb_012053_010 Hb_000589_160--Hb_012053_010 Hb_004100_090 Hb_004100_090 Hb_000589_160--Hb_004100_090 Hb_001369_600 Hb_001369_600 Hb_000589_160--Hb_001369_600 Hb_002105_030 Hb_002105_030 Hb_000589_160--Hb_002105_030 Hb_002784_150 Hb_002784_150 Hb_000033_040--Hb_002784_150 Hb_027892_040 Hb_027892_040 Hb_000033_040--Hb_027892_040 Hb_000033_040--Hb_000589_160 Hb_058143_010 Hb_058143_010 Hb_000033_040--Hb_058143_010 Hb_000078_020 Hb_000078_020 Hb_000033_040--Hb_000078_020 Hb_012053_040 Hb_012053_040 Hb_007426_050--Hb_012053_040 Hb_007426_050--Hb_000563_260 Hb_001348_230 Hb_001348_230 Hb_007426_050--Hb_001348_230 Hb_007426_050--Hb_001369_600 Hb_029879_090 Hb_029879_090 Hb_007426_050--Hb_029879_090 Hb_141194_010 Hb_141194_010 Hb_007426_050--Hb_141194_010 Hb_001369_210 Hb_001369_210 Hb_000352_160--Hb_001369_210 Hb_000352_160--Hb_001348_230 Hb_002588_040 Hb_002588_040 Hb_000352_160--Hb_002588_040 Hb_000352_160--Hb_001146_060 Hb_001767_050 Hb_001767_050 Hb_000352_160--Hb_001767_050 Hb_001143_070 Hb_001143_070 Hb_000352_160--Hb_001143_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.512898 0.218893 0.246093 0.518691 0.0482173 0.477782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55553 17.2051 10.1732 0.427326 0.89201

CAGE analysis