Hb_012053_040

Information

Type -
Description -
Location Contig12053: 34160-40030
Sequence    

Annotation

kegg
ID cic:CICLE_v10027727mg
description hypothetical protein
nr
ID XP_012076169.1
description PREDICTED: putative phospholipid:diacylglycerol acyltransferase 2 [Jatropha curcas]
swissprot
ID Q9FYC7
description Putative phospholipid:diacylglycerol acyltransferase 2 OS=Arabidopsis thaliana GN=PDAT2 PE=3 SV=1
trembl
ID A0A067KE15
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11235 PE=4 SV=1
Gene Ontology
ID GO:0008374
description phospholipid:diacylglycerol acyltransferase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06373: 34066-36342 , PASA_asmbl_06375: 37099-37813
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012053_040 0.0 - - PREDICTED: putative phospholipid:diacylglycerol acyltransferase 2 [Jatropha curcas]
2 Hb_007426_050 0.1409650776 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]
3 Hb_001511_140 0.1446363228 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
4 Hb_000788_080 0.1533348959 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
5 Hb_001776_170 0.1550768163 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001143_070 0.1585353717 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
7 Hb_000111_010 0.1608603571 - - DNA-directed RNA polymerase, putative [Ricinus communis]
8 Hb_113906_010 0.1633156986 - - hypothetical protein JCGZ_18857 [Jatropha curcas]
9 Hb_091433_040 0.1719337302 - - PREDICTED: josephin-like protein [Jatropha curcas]
10 Hb_000979_250 0.1746683135 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002704_050 0.1787786641 - - cysteine-type peptidase, putative [Ricinus communis]
12 Hb_004942_020 0.1792095384 - - Potassium transporter, putative [Ricinus communis]
13 Hb_000450_020 0.1801311245 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001369_600 0.183290122 - - kinase, putative [Ricinus communis]
15 Hb_005914_070 0.1866781762 - - conserved hypothetical protein [Ricinus communis]
16 Hb_141194_010 0.1883036385 - - PREDICTED: protein ZINC INDUCED FACILITATOR 1-like isoform X2 [Populus euphratica]
17 Hb_003095_070 0.1890449126 - - hypothetical protein POPTR_0009s11230g [Populus trichocarpa]
18 Hb_000227_200 0.1895923552 - - PREDICTED: protein FANTASTIC FOUR 3 [Populus euphratica]
19 Hb_000809_030 0.1918934116 desease resistance Gene Name: RPW8 PREDICTED: probable disease resistance protein At5g66900 [Prunus mume]
20 Hb_002759_240 0.1941483234 - - hypothetical protein EUGRSUZ_E01319 [Eucalyptus grandis]

Gene co-expression network

sample Hb_012053_040 Hb_012053_040 Hb_007426_050 Hb_007426_050 Hb_012053_040--Hb_007426_050 Hb_001511_140 Hb_001511_140 Hb_012053_040--Hb_001511_140 Hb_000788_080 Hb_000788_080 Hb_012053_040--Hb_000788_080 Hb_001776_170 Hb_001776_170 Hb_012053_040--Hb_001776_170 Hb_001143_070 Hb_001143_070 Hb_012053_040--Hb_001143_070 Hb_000111_010 Hb_000111_010 Hb_012053_040--Hb_000111_010 Hb_000563_260 Hb_000563_260 Hb_007426_050--Hb_000563_260 Hb_001348_230 Hb_001348_230 Hb_007426_050--Hb_001348_230 Hb_001369_600 Hb_001369_600 Hb_007426_050--Hb_001369_600 Hb_029879_090 Hb_029879_090 Hb_007426_050--Hb_029879_090 Hb_141194_010 Hb_141194_010 Hb_007426_050--Hb_141194_010 Hb_001511_140--Hb_000788_080 Hb_001511_140--Hb_001776_170 Hb_000979_250 Hb_000979_250 Hb_001511_140--Hb_000979_250 Hb_002759_240 Hb_002759_240 Hb_001511_140--Hb_002759_240 Hb_000592_060 Hb_000592_060 Hb_001511_140--Hb_000592_060 Hb_003095_070 Hb_003095_070 Hb_000788_080--Hb_003095_070 Hb_005000_160 Hb_005000_160 Hb_000788_080--Hb_005000_160 Hb_000613_160 Hb_000613_160 Hb_000788_080--Hb_000613_160 Hb_001159_200 Hb_001159_200 Hb_000788_080--Hb_001159_200 Hb_009838_040 Hb_009838_040 Hb_000788_080--Hb_009838_040 Hb_002067_140 Hb_002067_140 Hb_001776_170--Hb_002067_140 Hb_001776_170--Hb_001369_600 Hb_012053_050 Hb_012053_050 Hb_001776_170--Hb_012053_050 Hb_001776_170--Hb_002759_240 Hb_001776_170--Hb_000979_250 Hb_002989_040 Hb_002989_040 Hb_001143_070--Hb_002989_040 Hb_000103_030 Hb_000103_030 Hb_001143_070--Hb_000103_030 Hb_001143_070--Hb_001348_230 Hb_002290_050 Hb_002290_050 Hb_001143_070--Hb_002290_050 Hb_004942_020 Hb_004942_020 Hb_001143_070--Hb_004942_020 Hb_000352_160 Hb_000352_160 Hb_001143_070--Hb_000352_160 Hb_000111_010--Hb_000788_080 Hb_091433_040 Hb_091433_040 Hb_000111_010--Hb_091433_040 Hb_005914_070 Hb_005914_070 Hb_000111_010--Hb_005914_070 Hb_000103_110 Hb_000103_110 Hb_000111_010--Hb_000103_110 Hb_000363_150 Hb_000363_150 Hb_000111_010--Hb_000363_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.95175 2.99276 4.94654 5.23687 3.83059 1.31934
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
67.6489 166.76 153.051 8.39594 5.02726

CAGE analysis