Hb_023001_070

Information

Type -
Description -
Location Contig23001: 66058-77030
Sequence    

Annotation

kegg
ID egr:104452976
description dnaJ protein ERDJ3A-like
nr
ID XP_010065779.1
description PREDICTED: dnaJ protein ERDJ3A-like [Eucalyptus grandis]
swissprot
ID Q9SR96
description DnaJ protein ERDJ3A OS=Arabidopsis thaliana GN=ERDJ3A PE=1 SV=1
trembl
ID A0A059DCM2
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00545 PE=4 SV=1
Gene Ontology
ID GO:0008152
description dnaj protein erdj3a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24102: 75062-75727 , PASA_asmbl_24103: 75748-77335
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023001_070 0.0 - - PREDICTED: dnaJ protein ERDJ3A-like [Eucalyptus grandis]
2 Hb_000538_010 0.1646106652 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 1 isoform X2 [Jatropha curcas]
3 Hb_001307_010 0.1650536474 - - PREDICTED: uncharacterized protein LOC103939917 [Pyrus x bretschneideri]
4 Hb_000163_240 0.1771310539 - - PREDICTED: protein OPI10 homolog [Jatropha curcas]
5 Hb_008406_040 0.1779590764 - - -
6 Hb_000218_020 0.1801845998 - - synaptosomal associated protein, putative [Ricinus communis]
7 Hb_001454_220 0.1819272523 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
8 Hb_002450_140 0.1819727443 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
9 Hb_000116_510 0.1852648542 - - PREDICTED: RNA-binding protein 24-A-like isoform X2 [Jatropha curcas]
10 Hb_013394_060 0.1859195702 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
11 Hb_003228_030 0.1934836462 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
12 Hb_000488_010 0.1950836694 - - 18.1 kDa class I heat shock protein [Jatropha curcas]
13 Hb_002400_230 0.1952301314 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
14 Hb_003026_030 0.1955622055 - - transformer serine/arginine-rich ribonucleoprotein [Populus trichocarpa]
15 Hb_002311_140 0.1957925129 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 15-like [Jatropha curcas]
16 Hb_003018_040 0.1969724376 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
17 Hb_000997_150 0.1981261252 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_031711_010 0.1981999658 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
19 Hb_001277_360 0.1991300461 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
20 Hb_002999_060 0.2008089475 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]

Gene co-expression network

sample Hb_023001_070 Hb_023001_070 Hb_000538_010 Hb_000538_010 Hb_023001_070--Hb_000538_010 Hb_001307_010 Hb_001307_010 Hb_023001_070--Hb_001307_010 Hb_000163_240 Hb_000163_240 Hb_023001_070--Hb_000163_240 Hb_008406_040 Hb_008406_040 Hb_023001_070--Hb_008406_040 Hb_000218_020 Hb_000218_020 Hb_023001_070--Hb_000218_020 Hb_001454_220 Hb_001454_220 Hb_023001_070--Hb_001454_220 Hb_000538_010--Hb_001307_010 Hb_031711_010 Hb_031711_010 Hb_000538_010--Hb_031711_010 Hb_000390_220 Hb_000390_220 Hb_000538_010--Hb_000390_220 Hb_013394_060 Hb_013394_060 Hb_000538_010--Hb_013394_060 Hb_000920_250 Hb_000920_250 Hb_000538_010--Hb_000920_250 Hb_001189_130 Hb_001189_130 Hb_000538_010--Hb_001189_130 Hb_167381_020 Hb_167381_020 Hb_001307_010--Hb_167381_020 Hb_000422_110 Hb_000422_110 Hb_001307_010--Hb_000422_110 Hb_001307_010--Hb_031711_010 Hb_009771_100 Hb_009771_100 Hb_001307_010--Hb_009771_100 Hb_011909_060 Hb_011909_060 Hb_001307_010--Hb_011909_060 Hb_001307_010--Hb_001454_220 Hb_001898_240 Hb_001898_240 Hb_000163_240--Hb_001898_240 Hb_003682_030 Hb_003682_030 Hb_000163_240--Hb_003682_030 Hb_010998_040 Hb_010998_040 Hb_000163_240--Hb_010998_040 Hb_003666_020 Hb_003666_020 Hb_000163_240--Hb_003666_020 Hb_004648_090 Hb_004648_090 Hb_000163_240--Hb_004648_090 Hb_001804_110 Hb_001804_110 Hb_000163_240--Hb_001804_110 Hb_013749_020 Hb_013749_020 Hb_008406_040--Hb_013749_020 Hb_000116_510 Hb_000116_510 Hb_008406_040--Hb_000116_510 Hb_000120_420 Hb_000120_420 Hb_008406_040--Hb_000120_420 Hb_008406_040--Hb_167381_020 Hb_000227_310 Hb_000227_310 Hb_008406_040--Hb_000227_310 Hb_118840_050 Hb_118840_050 Hb_008406_040--Hb_118840_050 Hb_002282_060 Hb_002282_060 Hb_000218_020--Hb_002282_060 Hb_012082_010 Hb_012082_010 Hb_000218_020--Hb_012082_010 Hb_007576_220 Hb_007576_220 Hb_000218_020--Hb_007576_220 Hb_000526_060 Hb_000526_060 Hb_000218_020--Hb_000526_060 Hb_003018_040 Hb_003018_040 Hb_000218_020--Hb_003018_040 Hb_002073_280 Hb_002073_280 Hb_000218_020--Hb_002073_280 Hb_000024_120 Hb_000024_120 Hb_001454_220--Hb_000024_120 Hb_001454_220--Hb_002073_280 Hb_002902_020 Hb_002902_020 Hb_001454_220--Hb_002902_020 Hb_000345_490 Hb_000345_490 Hb_001454_220--Hb_000345_490 Hb_000230_430 Hb_000230_430 Hb_001454_220--Hb_000230_430 Hb_001454_220--Hb_007576_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.837613 3.7538 1.7834 0.988807 3.52439 0.559515
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.699046 1.013 0.216228 0.335744 0.782083

CAGE analysis