Hb_015531_010

Information

Type -
Description -
Location Contig15531: 17351-18469
Sequence    

Annotation

kegg
ID pop:POPTR_0003s15540g
description POPTRDRAFT_757758; hypothetical protein
nr
ID XP_012075498.1
description PREDICTED: uncharacterized protein LOC105636764 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10998 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015531_010 0.0 - - PREDICTED: uncharacterized protein LOC105636764 [Jatropha curcas]
2 Hb_000308_010 0.1457757688 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
3 Hb_000046_520 0.1652167467 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
4 Hb_003038_110 0.1775469037 - - hypothetical protein JCGZ_14961 [Jatropha curcas]
5 Hb_008775_030 0.1853077045 - - PREDICTED: ferric reduction oxidase 7, chloroplastic-like [Jatropha curcas]
6 Hb_004109_250 0.1932803184 - - unknown [Populus trichocarpa x Populus deltoides]
7 Hb_000041_260 0.2012753187 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
8 Hb_002794_040 0.2021683654 - - PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Jatropha curcas]
9 Hb_022092_040 0.204353307 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
10 Hb_000260_240 0.20528186 - - hypothetical protein JCGZ_00622 [Jatropha curcas]
11 Hb_008173_130 0.208077673 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
12 Hb_173029_030 0.2096403476 - - conserved hypothetical protein [Ricinus communis]
13 Hb_107078_010 0.210580486 - - -
14 Hb_065133_010 0.212396291 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
15 Hb_188739_010 0.2141691938 - - protein binding protein, putative [Ricinus communis]
16 Hb_006935_040 0.2149612873 - - PREDICTED: uncharacterized protein LOC105629236 [Jatropha curcas]
17 Hb_000110_240 0.215420438 - - PREDICTED: uncharacterized protein LOC105642006 isoform X3 [Jatropha curcas]
18 Hb_002965_070 0.2161338603 - - PREDICTED: extensin [Jatropha curcas]
19 Hb_001579_190 0.2168870907 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001396_040 0.2171764671 - - PREDICTED: uncharacterized protein LOC105644845 [Jatropha curcas]

Gene co-expression network

sample Hb_015531_010 Hb_015531_010 Hb_000308_010 Hb_000308_010 Hb_015531_010--Hb_000308_010 Hb_000046_520 Hb_000046_520 Hb_015531_010--Hb_000046_520 Hb_003038_110 Hb_003038_110 Hb_015531_010--Hb_003038_110 Hb_008775_030 Hb_008775_030 Hb_015531_010--Hb_008775_030 Hb_004109_250 Hb_004109_250 Hb_015531_010--Hb_004109_250 Hb_000041_260 Hb_000041_260 Hb_015531_010--Hb_000041_260 Hb_008173_130 Hb_008173_130 Hb_000308_010--Hb_008173_130 Hb_004712_090 Hb_004712_090 Hb_000308_010--Hb_004712_090 Hb_011918_030 Hb_011918_030 Hb_000308_010--Hb_011918_030 Hb_000134_260 Hb_000134_260 Hb_000308_010--Hb_000134_260 Hb_002965_070 Hb_002965_070 Hb_000308_010--Hb_002965_070 Hb_000046_520--Hb_008775_030 Hb_000046_520--Hb_003038_110 Hb_107078_010 Hb_107078_010 Hb_000046_520--Hb_107078_010 Hb_002794_040 Hb_002794_040 Hb_000046_520--Hb_002794_040 Hb_007576_130 Hb_007576_130 Hb_000046_520--Hb_007576_130 Hb_000392_240 Hb_000392_240 Hb_000046_520--Hb_000392_240 Hb_001022_020 Hb_001022_020 Hb_003038_110--Hb_001022_020 Hb_001396_040 Hb_001396_040 Hb_003038_110--Hb_001396_040 Hb_003038_110--Hb_000134_260 Hb_002374_200 Hb_002374_200 Hb_003038_110--Hb_002374_200 Hb_001951_210 Hb_001951_210 Hb_008775_030--Hb_001951_210 Hb_000020_080 Hb_000020_080 Hb_008775_030--Hb_000020_080 Hb_008775_030--Hb_000308_010 Hb_001579_190 Hb_001579_190 Hb_008775_030--Hb_001579_190 Hb_008775_030--Hb_011918_030 Hb_003077_010 Hb_003077_010 Hb_004109_250--Hb_003077_010 Hb_000494_010 Hb_000494_010 Hb_004109_250--Hb_000494_010 Hb_000349_170 Hb_000349_170 Hb_004109_250--Hb_000349_170 Hb_000110_240 Hb_000110_240 Hb_004109_250--Hb_000110_240 Hb_000500_330 Hb_000500_330 Hb_004109_250--Hb_000500_330 Hb_000388_040 Hb_000388_040 Hb_004109_250--Hb_000388_040 Hb_000041_260--Hb_001579_190 Hb_004218_050 Hb_004218_050 Hb_000041_260--Hb_004218_050 Hb_001934_040 Hb_001934_040 Hb_000041_260--Hb_001934_040 Hb_010683_070 Hb_010683_070 Hb_000041_260--Hb_010683_070 Hb_006615_220 Hb_006615_220 Hb_000041_260--Hb_006615_220 Hb_000343_010 Hb_000343_010 Hb_000041_260--Hb_000343_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0240922 0.30878 1.12748 0.109333 0.127895 0.0206189
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0347154 0 0.0557025 0.214655

CAGE analysis