Hb_014834_060

Information

Type -
Description -
Location Contig14834: 38922-52102
Sequence    

Annotation

kegg
ID rcu:RCOM_1387580
description hypothetical protein
nr
ID XP_012069994.1
description PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03412 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12175: 38875-51271 , PASA_asmbl_12178: 42816-43250
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014834_060 0.0 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
2 Hb_000896_060 0.0561991903 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_005188_040 0.0784331359 - - PREDICTED: protein furry homolog-like [Nicotiana sylvestris]
4 Hb_024185_010 0.0800780711 transcription factor TF Family: PHD PREDICTED: histone acetyltransferase HAC1 isoform X1 [Jatropha curcas]
5 Hb_000526_060 0.0811912514 - - PREDICTED: clustered mitochondria protein [Jatropha curcas]
6 Hb_000703_130 0.0833532568 - - PREDICTED: ATP-dependent RNA helicase DHX36 [Jatropha curcas]
7 Hb_000836_020 0.0834481478 transcription factor TF Family: SNF2 Chromo domain protein, putative [Ricinus communis]
8 Hb_000123_350 0.0839516364 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
9 Hb_044653_020 0.0840078493 transcription factor, desease resistance TF Family: GNAT, Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
10 Hb_000117_070 0.0851244533 - - PREDICTED: branchpoint-bridging protein [Jatropha curcas]
11 Hb_011242_060 0.0891835632 transcription factor TF Family: SNF2 Chromo domain protein, putative [Ricinus communis]
12 Hb_012368_100 0.0892806889 - - PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
13 Hb_003060_090 0.0896803177 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
14 Hb_003604_050 0.0937261224 - - PREDICTED: MAP3K epsilon protein kinase 1-like isoform X2 [Jatropha curcas]
15 Hb_003581_170 0.0937676216 - - PREDICTED: alpha-amylase 3, chloroplastic [Jatropha curcas]
16 Hb_000189_100 0.0949932009 - - PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Jatropha curcas]
17 Hb_144744_010 0.0950244597 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
18 Hb_000265_090 0.0951653309 - - PREDICTED: flowering time control protein FPA [Jatropha curcas]
19 Hb_007575_080 0.0957989283 - - PREDICTED: lysine-specific histone demethylase 1 homolog 3 [Jatropha curcas]
20 Hb_009028_010 0.0966250046 - - PREDICTED: probable disease resistance protein At1g12280 [Jatropha curcas]

Gene co-expression network

sample Hb_014834_060 Hb_014834_060 Hb_000896_060 Hb_000896_060 Hb_014834_060--Hb_000896_060 Hb_005188_040 Hb_005188_040 Hb_014834_060--Hb_005188_040 Hb_024185_010 Hb_024185_010 Hb_014834_060--Hb_024185_010 Hb_000526_060 Hb_000526_060 Hb_014834_060--Hb_000526_060 Hb_000703_130 Hb_000703_130 Hb_014834_060--Hb_000703_130 Hb_000836_020 Hb_000836_020 Hb_014834_060--Hb_000836_020 Hb_000896_060--Hb_000526_060 Hb_000117_070 Hb_000117_070 Hb_000896_060--Hb_000117_070 Hb_044653_020 Hb_044653_020 Hb_000896_060--Hb_044653_020 Hb_012368_100 Hb_012368_100 Hb_000896_060--Hb_012368_100 Hb_000123_350 Hb_000123_350 Hb_000896_060--Hb_000123_350 Hb_002542_130 Hb_002542_130 Hb_005188_040--Hb_002542_130 Hb_004785_030 Hb_004785_030 Hb_005188_040--Hb_004785_030 Hb_001545_150 Hb_001545_150 Hb_005188_040--Hb_001545_150 Hb_011242_060 Hb_011242_060 Hb_005188_040--Hb_011242_060 Hb_000265_090 Hb_000265_090 Hb_005188_040--Hb_000265_090 Hb_009028_010 Hb_009028_010 Hb_005188_040--Hb_009028_010 Hb_007575_080 Hb_007575_080 Hb_024185_010--Hb_007575_080 Hb_000720_150 Hb_000720_150 Hb_024185_010--Hb_000720_150 Hb_006117_080 Hb_006117_080 Hb_024185_010--Hb_006117_080 Hb_008053_040 Hb_008053_040 Hb_024185_010--Hb_008053_040 Hb_000661_130 Hb_000661_130 Hb_024185_010--Hb_000661_130 Hb_024185_010--Hb_000703_130 Hb_000526_060--Hb_000117_070 Hb_007818_030 Hb_007818_030 Hb_000526_060--Hb_007818_030 Hb_120470_010 Hb_120470_010 Hb_000526_060--Hb_120470_010 Hb_155159_010 Hb_155159_010 Hb_000526_060--Hb_155159_010 Hb_000526_060--Hb_000703_130 Hb_000703_130--Hb_000265_090 Hb_000176_100 Hb_000176_100 Hb_000703_130--Hb_000176_100 Hb_000703_130--Hb_007818_030 Hb_009476_090 Hb_009476_090 Hb_000703_130--Hb_009476_090 Hb_000579_010 Hb_000579_010 Hb_000703_130--Hb_000579_010 Hb_002687_090 Hb_002687_090 Hb_000703_130--Hb_002687_090 Hb_003581_170 Hb_003581_170 Hb_000836_020--Hb_003581_170 Hb_000836_020--Hb_011242_060 Hb_001699_280 Hb_001699_280 Hb_000836_020--Hb_001699_280 Hb_000836_020--Hb_000265_090 Hb_000836_020--Hb_000703_130 Hb_188063_010 Hb_188063_010 Hb_000836_020--Hb_188063_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.9408 77.0442 17.4705 18.4578 24.1694 30.1122
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.6057 12.1725 15.4689 24.1481 30.255

CAGE analysis